dsUpload 4.7.1
Features
Updated README to explain Armadillo 2 users how to update/install dsUpload.
dsUpload Version 4.7.x is compatible with Armadillo 2. When installing this version of dsUpload, the install.packages command might install the newest version (incompatible) of MolgenisArmadillo.
Run these commands (Rstudio) to install the correct version of MolgenisArmadillo:
Install devtools:
install.packages("devtools")
Load devtools and install ds-upload 4.7.1
library(devtools)
devtools::install_github("lifecycle-project/[email protected]")
You will get the following error message
namespace ‘MolgenisArmadillo’ 2.0.0 is being loaded, but == 1.1.3 is required
Next you need to remove MolgenisArmadillo
unloadNamespace("MolgenisArmadillo")
remove.packages("MolgenisArmadillo")
You might have to install these additional packages
install.packages(c("aws.iam", "aws.s3"))
Next we install a previous version of MolgenisArmadillo 1.1.3
packageurl <- "https://cran.r-project.org/src/contrib/Archive/MolgenisArmadillo/MolgenisArmadillo_1.1.3.tar.gz"
install.packages(packageurl, repos=NULL, type="source")
Now we (again) install dsUpload 4.7.1
devtools::install_github("lifecycle-project/[email protected]")
Make sure you do NOT update MolgenisArmadillo to another version then 1.1.3, select option 3
Downloading GitHub repo lifecycle-project/[email protected]
These packages have more recent versions available.
It is recommended to update all of them.
Which would you like to update?
1: All
2: CRAN packages only
3: None
4: MolgenisA... (1.1.3 -> 2.0.0) [CRAN]
Enter one or more numbers, or an empty line to skip updates: 3
After that you should be able to load dsUpload without any problems.
library(dsUpload)
If you are asked to update MolgenisArmadillo to version 2.0.x please skip,
this in order for dsUpload 4.7.x to work with Armadillo 2.
What's Changed
- chore: freeze versions for armadillo 2 and update docs by @marikaris in #120
Full Changelog: 4.7.0...4.7.1
