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Merge remote-tracking branch 'origin/main' into lvreynoso/diamond_sen… Integration Tests #1990: Commit eff1869 pushed by lvreynoso
May 9, 2024 00:49 38s lvreynoso/diamond_sensitive
lvreynoso/diamond_sensitive
May 9, 2024 00:49 38s
Bump rustix in /workflows/index-generation/ncbi-compress Integration Tests #1989: Commit 477ec0b pushed by dependabot bot
May 8, 2024 22:34 40m 54s dependabot/cargo/workflows/index-generation/ncbi-compress/rustix-0.37.27
dependabot/cargo/workflows/index-generation/ncbi-compress/rustix-0.37.27
May 8, 2024 22:34 40m 54s
Bump shlex in /workflows/index-generation/ncbi-compress Integration Tests #1988: Commit 64da5ce pushed by dependabot bot
May 8, 2024 22:33 29m 57s dependabot/cargo/workflows/index-generation/ncbi-compress/shlex-1.3.0
dependabot/cargo/workflows/index-generation/ncbi-compress/shlex-1.3.0
May 8, 2024 22:33 29m 57s
NCBI Index Compression (#262) Integration Tests #1987: Commit 6d4a2be pushed by phoenixAja
May 8, 2024 22:33 17m 27s main
main
May 8, 2024 22:33 17m 27s
Fix string interpolation for short read alignment run locally Integration Tests #1986: Commit 4b64746 pushed by lvreynoso
May 8, 2024 22:22 41s lvreynoso/diamond_sensitive
lvreynoso/diamond_sensitive
May 8, 2024 22:22 41s
Merge branch 'main' into tmorse-nt-compression Integration Tests #1985: Commit b7dc9db pushed by phoenixAja
May 8, 2024 22:00 50s tmorse-nt-compression
tmorse-nt-compression
May 8, 2024 22:00 50s
Move diamond changes to another branch Integration Tests #1984: Commit 72ca008 pushed by lvreynoso
May 8, 2024 21:47 1m 2s lvreynoso/diamond_sensitive
lvreynoso/diamond_sensitive
May 8, 2024 21:47 1m 2s
Parameterize aligner wdl versions Integration Tests #1983: Commit aefd121 pushed by lvreynoso
May 8, 2024 21:45 1m 7s lvreynoso/specify_diamond_minmap2_wdl_versions
lvreynoso/specify_diamond_minmap2_wdl_versions
May 8, 2024 21:45 1m 7s
Allow multiple arguments to diamond blastx Integration Tests #1982: Commit 3a3c9bd pushed by lvreynoso
May 8, 2024 21:23 9m 3s lvreynoso/enable_multiple_diamond_args
lvreynoso/enable_multiple_diamond_args
May 8, 2024 21:23 9m 3s
Remove SRST2 from workflows (#354) Integration Tests #1981: Commit 70567a9 pushed by lvreynoso
May 8, 2024 20:32 23m 3s main
main
May 8, 2024 20:32 23m 3s
Revert release Integration Tests #1980: Commit 6c3fbad pushed by lvreynoso
May 8, 2024 16:01 53s lvreynoso/remove_srst2
lvreynoso/remove_srst2
May 8, 2024 16:01 53s
Test release Integration Tests #1979: Commit 64ba2c3 pushed by lvreynoso
May 8, 2024 00:10 25s lvreynoso/remove_srst2
lvreynoso/remove_srst2
May 8, 2024 00:10 25s
Add backwards compatibility to diamond_blastx Integration Tests #1978: Commit 6122cfd pushed by lvreynoso
May 7, 2024 22:00 9m 51s lvreynoso/diamond_sensitive
lvreynoso/diamond_sensitive
May 7, 2024 22:00 9m 51s
Lint Integration Tests #1977: Commit e69578c pushed by lvreynoso
May 7, 2024 21:03 37s lvreynoso/remove_srst2
lvreynoso/remove_srst2
May 7, 2024 21:03 37s
Remove SRST2 from wdl, dockerfile, dag Integration Tests #1976: Commit d95d3c6 pushed by lvreynoso
May 7, 2024 18:29 22m 12s lvreynoso/remove_srst2
lvreynoso/remove_srst2
May 7, 2024 18:29 22m 12s
Bump jinja2 from 3.1.3 to 3.1.4 in /workflows/benchmark Integration Tests #1975: Commit 1fe4477 pushed by dependabot bot
May 6, 2024 20:53 2m 39s dependabot/pip/workflows/benchmark/jinja2-3.1.4
dependabot/pip/workflows/benchmark/jinja2-3.1.4
May 6, 2024 20:53 2m 39s
Merge branch 'main' into tmorse-nt-compression Integration Tests #1974: Commit 8afaba7 pushed by phoenixAja
May 6, 2024 16:58 53m 15s tmorse-nt-compression
tmorse-nt-compression
May 6, 2024 16:58 53m 15s
[CZID-9457] - update PHAGE_FAMILIES_NAMES (#352) Integration Tests #1973: Commit 4ccee1a pushed by ninabernick
May 6, 2024 16:33 38s main
main
May 6, 2024 16:33 38s
add more phage families Integration Tests #1972: Commit 9bee2f5 pushed by phoenixAja
May 6, 2024 16:02 16m 35s phoenix/update-phage-families
phoenix/update-phage-families
May 6, 2024 16:02 16m 35s
update PHAGE_FAMILIES_NAMES Integration Tests #1971: Commit 15c9556 pushed by phoenixAja
May 3, 2024 22:37 16m 18s phoenix/update-phage-families
phoenix/update-phage-families
May 3, 2024 22:37 16m 18s
Deleted accidentally committed file Integration Tests #1970: Commit 1d47826 pushed by lvreynoso
May 3, 2024 02:33 15h 43m 8s lvreynoso/diamond_sensitive
lvreynoso/diamond_sensitive
May 3, 2024 02:33 15h 43m 8s
Deleted accidentally committed file Integration Tests #1969: Commit 13ac952 pushed by lvreynoso
May 3, 2024 02:25 15h 50m 25s lvreynoso/diamond_sensitive
lvreynoso/diamond_sensitive
May 3, 2024 02:25 15h 50m 25s
Use main brainch for diamond and '=' to pass --diamond-args Integration Tests #1968: Commit b2d6ba2 pushed by lvreynoso
May 3, 2024 02:24 10h 7m 20s lvreynoso/diamond_sensitive
lvreynoso/diamond_sensitive
May 3, 2024 02:24 10h 7m 20s
Merge remote-tracking branch 'origin/main' into lvreynoso/diamond_sen… Integration Tests #1967: Commit 650e16c pushed by lvreynoso
May 2, 2024 19:32 26s lvreynoso/diamond_sensitive
lvreynoso/diamond_sensitive
May 2, 2024 19:32 26s
[CZID-9262] Only call taxa with species level lineages in long-read-m… Integration Tests #1966: Commit dfb8475 pushed by lvreynoso
April 26, 2024 19:07 22m 25s main
main
April 26, 2024 19:07 22m 25s