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@programming-for-bio PDSB course EEEB 4050

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    19 repositories

    • hacks-5

      Public
      hack-the-planet course notebooks for session 5
      0•0•0•0•Updated Jan 25, 2021Jan 25, 2021

    • 1-Shell-Basics

      Public
      GNU General Public License v3.0
      •15•0•0•0•Updated Jan 10, 2021Jan 10, 2021

    • 0-Syllabus

      Public
      Syllabus for EEEB 4050
      GNU Lesser General Public License v3.0
      •2•2•0•0•Updated Oct 22, 2019Oct 22, 2019

    • project-submission

      Public
      0•0•0•0•Updated May 16, 2018May 16, 2018

    • 9-python-analysis1

      Public
      machine learning
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •11•0•0•0•Updated May 6, 2018May 6, 2018

    • 6-scientific-python

      Public
      Scientific tools for Python: Numpy, Scipy, Pandas
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •15•1•0•0•Updated May 6, 2018May 6, 2018

    • 11-plotting

      Public
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •12•0•0•0•Updated May 6, 2018May 6, 2018

    • 10-python-analysis2

      Public
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •13•0•0•0•Updated May 4, 2018May 4, 2018

    • 12-parallel-genomics

      Public
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •13•0•0•0•Updated May 3, 2018May 3, 2018

    • 8-python-web

      Public
      Python tools for scraping data from the web
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •12•0•0•0•Updated Apr 14, 2018Apr 14, 2018

    • records

      Public
      An example group project for PDSB
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •3•0•0•0•Updated Mar 25, 2018Mar 25, 2018

    • 7-remote-subprocess

      Public
      SSH connections to HPC; remote jupyter; subprocess module
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •12•0•0•0•Updated Mar 18, 2018Mar 18, 2018

    • project-proposal-guide

      Public
      Instructions for project proposals and proposals of proposals
      0•0•0•0•Updated Mar 9, 2018Mar 9, 2018

    • 4-Python-advanced

      Public
      Jupyter Notebook
      •16•0•0•0•Updated Mar 7, 2018Mar 7, 2018

    • seqlib

      Public
      a module developed as a practice exercise.
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Mar 4, 2018Mar 4, 2018

    • 3-Python-basics

      Public
      Jupyter Notebook
      •17•1•0•0•Updated Feb 21, 2018Feb 21, 2018

    • 5-Packaging

      Public
      Now we'll learn to write a Python package
      Jupyter Notebook
      •13•0•0•0•Updated Feb 19, 2018Feb 19, 2018

    • helloworld

      Public
      Python
      •1•0•0•0•Updated Feb 19, 2018Feb 19, 2018

    • 2-git-and-more

      Public
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •16•0•0•0•Updated Feb 10, 2018Feb 10, 2018