update dependencies

[glass-ships]

bioregistry no longer requires pydantic <2

This will allow for prefixmaps to open up its pydantic specification, and thus multiple other
packages such as koza, monarch-ingest, monarch-app, to update to pydantic v2

currently test fails on AttributeError: module 'bioregistry' has no attribute 'get_extended_prefix_map'

[cthoyt]

@glass-ships I changed this part of the Bioregistry's public interface, there's also a corresponding fix in https://github.com/linkml/prefixmaps/pull/52/files

[cthoyt]

@glass-ships it's also the case that bioregistry isn't a runtime requirement for prefixmaps, it's only used for regenerating the Bioregistry and merged prefix map

[glass-ships]

thanks @cthoyt! i noticed a comment in another PR that mentioned there was some overlap between this and others - let me know if my PR is redundant, I'd be happy to close as a duplicate

[cthoyt]

Thanks @glass-ships! Happy you were able to pull out this part and keep the "single responsibility principle" :)