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fix #556 #1061

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Feb 20, 2025
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2 changes: 1 addition & 1 deletion DESCRIPTION
Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
Type: Package
Package: parameters
Title: Processing of Model Parameters
Version: 0.24.1.1
Version: 0.24.1.2
Authors@R:
c(person(given = "Daniel",
family = "Lüdecke",
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2 changes: 2 additions & 0 deletions NEWS.md
Original file line number Diff line number Diff line change
Expand Up @@ -19,6 +19,8 @@

## Bug fixes

* Fixed issue with `model_parameters(<aovlist>, table_wide = TRUE)` with complex error structures ( #556 )

* Fixed issue when printing `model_parameters()` with models from `mgcv::gam()`.

* Fixed issues due to breaking changes in the latest release of the *datawizard*
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12 changes: 9 additions & 3 deletions R/methods_aov.R
Original file line number Diff line number Diff line change
Expand Up @@ -532,19 +532,25 @@ model_parameters.seqanova.svyglm <- model_parameters.aov
.anova_table_wide <- function(data, ...) {
wide_anova <- function(x) {
# creating numerator and denominator degrees of freedom
idxResid <- x$Parameter == "Residuals"
idxResid <- which(x$Parameter == "Residuals")
if (length(idxResid)) {
x$df_error <- x$df[idxResid]
x$Sum_Squares_Error <- x$Sum_Squares[idxResid]
x$Mean_Square_Error <- x$Sum_Squares[idxResid]
x <- x[!idxResid, ]
x$Mean_Square_Error <- x$Mean_Square[idxResid]
x <- x[-idxResid, ]
}
x
}

if ("Group" %in% colnames(data)) {
data <- split(data, data$Group)
data <- lapply(data, wide_anova)
data <- Filter(function(x) nrow(x) >= 1L, data)
cols <- unique(unlist(lapply(data, colnames)))
data <- lapply(data, function(x) {
x[, setdiff(cols, colnames(x))] <- NA
x
})
data <- do.call(rbind, data)
} else {
data <- wide_anova(data)
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49 changes: 49 additions & 0 deletions tests/testthat/test-model_parameters.aov.R
Original file line number Diff line number Diff line change
Expand Up @@ -84,3 +84,52 @@ test_that("model_parameters.anova", {
model <- aov(Sepal.Length ~ Species / Cat1 + Error(Cat2), data = iris)
expect_identical(sum(model_parameters(model, verbose = FALSE)$df), 149)
})


test_that("model_parameters.aov - table_wide", {
skip_if_not_installed("effectsize")
skip_if_not_installed("datawizard")

data("iris")
# can't use the pipe yet :(
iris_long <- datawizard::data_modify(iris, id = seq_along(Species))
iris_long <- datawizard::data_to_long(iris_long, select = colnames(iris)[1:4])
iris_long <- datawizard::data_separate(iris_long,
select = "name", separator = "\\.",
new_columns = c("attribute", "measure")
)

mod1 <- stats::aov(
formula = value ~ attribute * measure + Error(id),
data = iris_long
)

mod2 <- stats::aov(
formula = value ~ attribute * measure + Error(id / (attribute * measure)),
data = iris_long
)

mp1 <- model_parameters(mod1, eta_squared = "partial", ci = 0.95, table_wide = TRUE)
mp2 <- model_parameters(mod2, eta_squared = "partial", ci = 0.95, table_wide = TRUE)

expect_identical(nrow(mp1), 3L)
expect_identical(nrow(mp2), 6L)



mod1 <- aov(yield ~ N * P * K + Error(block), data = npk)

out1 <- model_parameters(mod1, table_wide = FALSE)
out2 <- model_parameters(mod1, table_wide = TRUE)

idx <- which(out1$Parameter == "Residuals")

expect_true(all(out2$Sum_Squares_Error %in% out1$Sum_Squares[idx]))
expect_true(all(out1$Sum_Squares[idx] %in% out2$Sum_Squares_Error))

expect_true(all(out2$Mean_Square_Error %in% out1$Mean_Square[idx]))
expect_true(all(out1$Mean_Square[idx] %in% out2$Mean_Square_Error))

expect_true(all(out2$df_error %in% out1$df[idx]))
expect_true(all(out1$df[idx] %in% out2$df_error))
})
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