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adding easyconfigs: gemelli-0.0.9-foss-2022a.eb
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Samuel Moors
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Jun 15, 2023
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easybuild/easyconfigs/g/gemelli/gemelli-0.0.9-foss-2022a.eb
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easyblock = 'PythonBundle' | ||
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name = 'gemelli' | ||
version = '0.0.9' | ||
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homepage = 'https://github.com/biocore/gemelli' | ||
description = """ | ||
Gemelli is a tool box for running both Robust Aitchison PCA (RPCA) and | ||
Compositional Tensor Factorization (CTF) on sparse compositional omics | ||
datasets. | ||
""" | ||
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toolchain = {'name': 'foss', 'version': '2022a'} | ||
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dependencies = [ | ||
('Python', '3.10.4'), | ||
('SciPy-bundle', '2022.05'), | ||
('scikit-learn', '1.1.2'), | ||
('scikit-bio', '0.5.7'), | ||
('h5py', '3.7.0'), | ||
] | ||
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exts_list = [ | ||
('tax2tree', '1.1', { | ||
'modulename': 't2t', | ||
'checksums': ['f1d28fb99c41bb10cc3c06bfd232891b0ad713f674a5c2ac2991dd99ed512da1'], | ||
}), | ||
('iow', '1.0.6', { | ||
'modulename': 'bp', | ||
'preinstallopts': """sed -i "/'nose /d" setup.py && """, | ||
'checksums': ['ac4f579a0881f1c827f75033a304341ae91d3a527cc6aed3fea53749f1b9951c'], | ||
}), | ||
('biom-format', '2.1.15', { | ||
'modulename': 'biom', | ||
'checksums': ['3bda2096e663dc1cb6f90f51b394da0838b9be5164a44370c134ce5b3b2a4dd3'], | ||
}), | ||
(name, version, { | ||
'preinstallopts': """sed -i "/'nose /d" setup.py && """, | ||
'checksums': ['e4fcf3087c12d8bd21397c1f3a88723282c294184b2ba7b899d5389305ad4729'], | ||
}), | ||
] | ||
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use_pip = True | ||
sanity_pip_check = True | ||
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sanity_check_commands = ['gemelli --help'] | ||
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moduleclass = 'devel' |