Merge pull request #18112 from eylenth/20230615140830_new_pr_GenomeTo…

…ols162

{bio}[GCC/12.2.0] GenomeTools v1.6.2

easybuild/easyconfigs/g/GenomeTools/GenomeTools-1.6.2-GCC-12.2.0.eb

@@ -0,0 +1,38 @@
+easyblock = 'ConfigureMake'
+
+name = 'GenomeTools'
+version = '1.6.2'
+
+homepage = 'http://genometools.org'
+description = "A comprehensive software library for efficient processing of structured genome annotations."
+
+toolchain = {'name': 'GCC', 'version': '12.2.0'}
+
+github_account = 'genometools'
+source_urls = [GITHUB_LOWER_SOURCE]
+sources = ['v%(version)s.tar.gz']
+checksums = ['974825ddc42602bdce3d5fbe2b6e2726e7a35e81b532a0dc236f6e375d18adac']
+
+# GenomeTools-1.6.2 has the following libraries bundled with it:
+# bzip2-1.0.6, cgilua-5.1.3, expat-2.0.1, lpeg-0.10.2, lua-5.1.5, luafilesystem-1.5.0, md5-1.2,
+# samtools-0.1.18, sqlite-3.33.0, tre-0.8.0, zlib-1.2.8
+#
+# Bundled libraries can be globally disabled with the option useshared=yes
+# However, it is preferable to use the bundled libraries due to the very old versions of some of them
+
+builddependencies = [('pkgconf', '1.9.3')]
+dependencies = [('Pango', '1.50.12')]
+
+skipsteps = ['configure']
+
+buildopts = 'useshared=no errorcheck=no cairo=yes threads=yes'
+installopts = 'prefix=%(installdir)s'
+
+sanity_check_paths = {
+    'files': ['bin/gt', 'bin/genometools-config', 'lib/libgenometools.a', 'lib/libgenometools.%s' % SHLIB_EXT],
+    'dirs': ['include', 'share'],
+}
+
+sanity_check_commands = ['gt -help']
+
+moduleclass = 'bio'