genozip-15.0.9

• VCF compression improvements including for VEP, gnomAD, ExAC, ICGC, COSMIC, dbNSFP, Mastermind -annotated files
• FASTQ with --fast: some tradeoffs were tweaked - now it is a little bit slower but significantly better compression
• Fixed bug that affected headerless SAM (but not BAM) files when compressed with a reference file with mismatching contig names

genozip-15.0.7

• Minor bug fixes
• License update: added consent to receving product-announcement emails.

genozip-15.0.5

• Minor bug fixes
• License update: clarify that hospitals of any type are excluded from academic license eligibility

genozip-15.0.4

NEW MAJOR RELEASE

• Introducing Deep compression - co-compression of related BAM and FASTQ files with --deep reduces overall
  compressed size by ~40%.
• Reduce compression time by ~40% on machines with > 50 cores
• GFF: support compressing GFF3 files with embedded FASTA
• BED: native support for compressing BED files - significantly better and faster compression.
• BAM: ~20% better compression for PacBio files with iq / dq / sq tags.
• VCF: better compression of dbSNP (INFO/VC field)
• VCF: better compression of DRAGEN gVCF files (FORMAT/ICNT, FORMAT/SPL)
• Reference files: redesigned reference caching - reference files generated with this release load significantly faster
  (older reference files are still supported) and Genozip no longer generates or uses reference .gcache and .hcache files.
• Reference cache management: --no-cache, genols --cache
• genozip --vblock option: maximum value is now 1024 (down from 2048)
• genozip: compression with --tar now also automatically tests
• --no-upgrade (new option) disables upgrade checks
• Backward compatibility: Genozip version 15 can decompress files generated by Genozip v11 or later and using reference files generated by v8 or later.
  To decompress earlier files, used Genozip v14.
• License changes
• Many, many other compression, speed and stability improvements.

genozip-14.0.35

• Bug fixes.

genozip-14.0.34

• Minor bug fixes

genozip-14.0.33

• Incremental improvements and minor bug fixes.

genozip-14.0.32

• FASTQ: Fixed bug in genocat of FASTQ files compressed with --pair which sometimes caused skipping displaying
  the beginning of the file. The bug was introduced in 14.0.3.
• Fixed bug with --licfile combined with --test - which incorrectly prompted for registration
• Filtering by Kraken: --taxid can now take multiple comma-separated taxonomy ids

genozip-14.0.31

• FASTQ, BAM: incremental compression improvements
• Minor bug fixes and improvements

genozip-14.0.30

• Minor bug fixes and improvements