recon-config.yaml. Commented out replicas that would have been overri…

…dden
ayendiki · Feb 9, 2022 · d208d24 · d208d24
1 parent ff96795
commit d208d24
Showing 1 changed file with 18 additions and 15 deletions.
diff --git a/distribution/etc/recon-config.yaml b/distribution/etc/recon-config.yaml
@@ -16,35 +16,38 @@ DoAntsN3:
     action: enable
     descr: Use ANTS N3BiasFieldCorrection instead of MNI N3
 
-DoAntsN4:
-    value: True
-    flags: -ants-n4
-    action: enable
-    descr: Use ANTS N4BiasFieldCorrection instead of MNI N3
+#Removed this because it is overridden below (no repeats allowed)
+#DoAntsN4:
+#    value: True
+#    flags: -ants-n4
+#    action: enable
+#    descr: Use ANTS N4BiasFieldCorrection instead of MNI N3
 
 DoAntsN4:
     value: True
     flags: -no-ants-n4
     action: disable
     descr: Do not use ANTS N4BiasFieldCorrection instead of MNI N3
 
-DoAntsDenoising:
-    value: True
-    flags: -ants-denoise
-    action: enable
-    descr: Use ANTS DenoiseImage before mri_segment
+#Removed this because it is overridden below (no repeats allowed)
+#DoAntsDenoising:
+#    value: True
+#    flags: -ants-denoise
+#    action: enable
+#    descr: Use ANTS DenoiseImage before mri_segment
 
 DoAntsDenoising:
     value: True
     flags: -no-ants-denoise
     action: disable
     descr: Do not use ANTS DenoiseImage before mri_segment
 
-DoRemesh:
-    value: True
-    flags: -remesh
-    action: enable
-    descr: Use Martin's code to remesh ?h.orig to improve triangle quality after topo fix
+#Removed this because it is overridden below (no repeats allowed)
+#DoRemesh:
+#    value: True
+#    flags: -remesh
+#    action: enable
+#    descr: Use Martin's code to remesh ?h.orig to improve triangle quality after topo fix
 
 DoRemesh:
     value: True