Minichain v1.3

Minichain v1.3

New Features

• Added support for "Haplotype-aware Sequence-to-Graph Alignment".

Precompiled Binaries

Precompiled binaries are provided for various architectures. Download the binary matching your architecture, rename it to minichain, and make it executable.

Example: For AVX512 Architecture

mv minichain.avx512 minichain
chmod +x minichain

# check version
./minichain --version

Minichain v1.2

Minichain v1.2 Release Notes

New Features

• 1.3X faster read mapping than the Minichain (v1.1).
• Improved read mapping accuracy.
• Reduced memory usage.

Minichain v1.1

Minichain v1.1 Release Notes

New Features

• Improved read mapping time for larger DAGs.
• Scales to UL ONT reads.
• Generates Pan-genome graph.
• Call structural variants.

Minichain v1.0

Minichain v1.0 Release Notes

Initial release of minichain.
To make a binary executable, do chmod +x minichain