Skip to content

Commit

Permalink
Tous les tests
Browse files Browse the repository at this point in the history
  • Loading branch information
ksbaczkowski authored Jan 11, 2019
1 parent 747f8d9 commit 74a334c
Show file tree
Hide file tree
Showing 20 changed files with 29,877 additions and 0 deletions.
99 changes: 99 additions & 0 deletions test/Botrytis/CHR215_TRAN.fa
Original file line number Diff line number Diff line change
@@ -0,0 +1,99 @@
>BC1T_16003 | Botrytis cinerea (B05.10) predicted protein (183 nt) Note(s): Spurious gene
ATGCCCAGGTCGGGAAGTCTTTCCCGACGACGACGTACATTTCGACTGGGTAGTTTCATC
GTTCACGTCAGAAAATTATTAGGTTTCGGGAACGAGATTAACGCCAATGAATTTTTGGTT
AGATGGTGCATGATGAACCTTCGGCATGAGAGCGATGTTATGAGGACAGAGGGACAGAAT
TGA
>BC1T_16004 | Botrytis cinerea (B05.10) predicted protein (210 nt)
ATGCGTATTCGGAAACCACAAACCTTCTGCCAGAAAGGACAAGAAGTTCAATTGATTGCG
TATATGGCAGAACCTTCCCGGAAGAGAGCTTGTGCTGCTGTTGAGGATTCAGTTAACTAT
GATCCAGGAAACAAGCCCAGTAAGCCATCTGGAGAACAGTCTGCTCGTGTTATTAGACAG
TTACAGGAGATCTTAGATCGACAAGTCTAA
>BC1T_16005 | Botrytis cinerea (B05.10) predicted protein (396 nt)
ATGGTTGGAAGTATGAAGCAGGTTCAATATCGCTCTTCAGCATCCGCTAGCGTTCCTGTC
GACTTTCGGTACTCGAATGCCACCACAATGCAAATGACCGTTTCTTTATCTGACTGTGGG
TATCACTTATCTGTGTCGAGGGTAGAGTGGTACTTTCAAGATGATATCATCCTTGCCGAC
TTGTGGTACTGGAATGCCACCAAAACACATCATCGATCTGTGGCAGAAGGCCAATCCAGT
AAAGACTATCAGCCATATCCAGTCGGCTGGAACAGTCGCGACAAGTACCCGAATAACATC
GATGTCGTGGCCGGTAAAGCATCCCGAGCTGTCCCACTCACAGAACCATATCACCCTGGC
AATCAACCACCTCCTTGGTACCAGCAGCGATGGTAA
>BC1T_16006 | Botrytis cinerea (B05.10) predicted protein (624 nt)
ATGCTCTGTATAGTTTCTGTACTCACTGTTGCGCTCGCTGGCGGGGCATCAGCTTTCACA
CCACCTGGGTTTGAACCATCTTCAACTAATGATCTCACTGTCGCATATGGCTCTAAGCTT
GCAACAAATGGAATCCAAATGTTACGAGCCGACACGGCCTATGCTCCTATTCTTGGTACA
GCCACAAAAATGAGCGGTACCTACGCAGTAATGATGGTTGATCCCGATATTCCACCCGCA
AAAGTGGGAGGTGATACATCACAATTTCTTCACTGGATGCAAGCCGATCTCACGTCGTCG
AATACCACGACGACTATCGGAGGTCAAAAAATCTACGAACTGATCAACGTAAAGAACACA
TCTGCATTCGCTACATATCTACAGCCAAATCCTCCAGACATTGCGCCAACTACTCATAGA
TATACTCAACTACTATTTAATACGACAGGTATGAACATGAGTCTAGCTTCACTTCAAACA
GCCGGAAAAACTAGAGGAAATTTCAATGCTACAAATGTAGTTAAAAGCGCAAAGCTGACA
GTTTTGATGGGGAACTCATTCGATGTTTCATTTGGAGATAAAGCGATAAATAATACAGGA
GCTTCAACAGGAAGTTCTACATAG
>BC1T_16007 | Botrytis cinerea (B05.10) predicted protein (213 nt)
ATGACCTTCCCGAAGCCACATTCTGCTGGCCATCTAGAAGCCATGCTCAACACTAAGATT
ACCACAAGATACAAACGTTGTGCAGGTGGTGGTGACCCCCCTAGACATGAAGAAGAACAG
GACGGGGCAAAGGAGTTAGAGTGCTTTCTCAAGACCCTGCGACAACATGGAATCCGATTT
ATCGCGGCATCAGAAATACGTGCTTTGTTTTAG
>BC1T_16008 | Botrytis cinerea (B05.10) predicted protein (801 nt)
ATGACTACTTCGTTGAACACAATCTCTGCACAAATGGTAATCGCTTTCGGAACTATGAAT
GGGGAGACTCTGCCGAGACATCCTGATAAGTTCTTCTTCATGGTTTTGCCAATGCCTACA
AGGGATGAGAGATGGGTTTGGATTGATCTGCTGGCACATGTTCGCGCTATATATATTCCA
ATCGCGTATTCGGCATCAGAAGACTACCCGGACCTTAGTACTTGGGTGCAGATTAACTTC
GCCAGAGATCGAACCGTGCCCGTCTGGCACGCTGGTTCGGAGTTTGAGGATTATAAGACC
GACAAGTTGACAGGTTTCGGCATAAAGAAGGATCGGACCCTTGGACTAGACTTCACCGGG
CTTGTGGAGTTGCTCAGTATTCCCCGTCAATTCCGCAAAGTTAACCCTTATTCAGGAAAG
CTCATTAGAATTGTTCCTGACAATTGGGTGAAGACGGTTTGGCTAGCTATCCAGAAAGCT
CATAACAGGGTTGACTTGATGTGGAAGTCTGTCGAAAAAACTTTCTGGATAGAAAATTTC
ACCAAGAATGCAATGGTGTTCGCTATTGGGTGGATCCCTGGCCCAGGTCCCTTTATGGCC
ATTGCATTCTCCCTGACTTGGACTGCAATCAAAGATGAGGAGGCATTCTGGAATGAACTT
AGCCTCTGGGCCCCCGGAGTGATCCTGGATGAAGCTAAGAAGGTTGAGAAGGAAACCAAG
GTAGGGAAACCTCCGGAAGGCGAGAAGGTTGATGACCCAGACGGAGGAATGGTTCTTGGA
GTTGCCGAAGCAGAAGAATAA
>BC1T_16009 | Botrytis cinerea (B05.10) hypothetical protein similar to SirI (1296 nt)
ATGGTTAACTCTGTTCCCATTGAGGACAGTGGTCTCTCTGCACGTTCGCGCCCTAAGGTA
GCAGCATTTATACCGGTGCTAAAAAATGTTGACAAGAACTTTGCGGTTGGGTCAGAAATT
GATGTGGATATGGCCATTGGCGAGAATTGGCTTATCCGACAGCCATTGATTGGCATATTC
AAAAAGGCTCTTAAAGATATCGCCGAGAAGGATCTCAACTATCCTCTTGGAGTAGGTGGA
CCTGCTCAAGTACTTGCTGCTTTCGCCTCGTTCTTCAACCAGTTTTTTTCTCCGTCCATT
CCAATCGAGCCAGATCATGTAGTTACTTTCTCCGGTGCAAGTACATGCCTGGATGGCTTG
CTCTATGCAATCTGTGATGAAGGGGATAGCATTATCCTACCGTCACCTTTTTGGGCCGGC
TATGTTCCATTTACCAAGTTTCGCGTCGATGTCAATATTGTCACCACGACAGATATTCCA
TGGCGTTCTACCACATCTATCGATATTGTCGCTGCGGTAAAGAAAGCATACTTCAGTGCA
CAAGACACCACGCGAATCAAGGCATTGCTTATGGCCAATCCACACAATCCGACTGGACAC
TGCTACTCCGCATCTGTGATCCGTGAGCTGATGGTGTTCTGTAAAGACAATGGATTGCAT
TATATATCGGATGAGATATTTGCTATGTCTTCTTTCAGAAGAGAGGAAGAGGGCCAGTTT
ACCTCCACACTTTCACTCATTAGTGACAATAAAGAAAGCCCTATGGATCCGAGTCGTCTA
CATGTGATCTACAGCATGAGTAAAGACTGGGGATCACCAGGTCTAAGAATGGCCTGCCTC
GTTTCTCCACGTAATCGTCCTGTTCTCGAAGGCAGTTGGATCTCCAACTACATGCAGACG
TCCAATCTAAATAATCTTTGTGTCATGGCTCTCTTCCACTCTCCCAGCCTTCCATCTATT
ATTAATTCTCTCAAACATCAACTCACACGTAACTACGGATGGCTTACGGAAGCACTGAAT
AGATGGGAGATCGAATACATACCTACTCATGCTGGATTTCATGTCTTTGCAAGGTTAGCT
AAAAATGCGCAAAGTTGGGGCGATGAAGCTGCAGTTGTTAAACAATTATTTGATGCAGGT
GTCATGGTGGTTCCTGGCAAGAATTTCGGAGGTGTTGATGGAGAATTCGGCTGGGTTCGT
CTATCGTTCTCAATTGAAGAGAAGAAATTGCGGGATGGATTATGGAGAATTGGGCAGACT
TTAGGCTTCGAAAGCAATAGGGAAAGGATTCAATAG
>BC1T_16010 | Botrytis cinerea (B05.10) beta-fructosidase (1455 nt)
ATGACCATCAGTACCAGTCCTGTTAGCACCACGGCTACTATCAGCACTACACTAAGTACA
ACATCTCGAGCCAGCCCAACTCCCGCGGCTCCTTATGACTTTCGTCCGACGTATCATTTT
GTTCCTGACCAGAATTGGATGAATGAGCCCAACGGACTTATCAAAATTGGCTCTACGTGG
CACCTGTTTTTCCAACACAACCCTACAGGCAATTTCTGGGGTAATATAAACTGGGGGCAT
GCAACCAGCACCGACCTCATAAACTGGGTCCATAAACCAGTTGCCATCTCGGACGCGGAC
GGTATTCAGGCTTTTACTGGGACTTCATATTACGATCCATCAAATCTATCAGGACTAGGG
ACGAGTGTAAATCCGCCGTATTTGGCTTTCTTTACCGGATATTTTTCTTCAAGCGGAGTT
CAGGATCAACGACTTGCATACAGCTTAGATCAAGGGACGACCTGGACAAAGTACTCGGGT
AATCCAATCGTATCACAACAACAAGAGTCACCGCATGATGTAACCAAAGGTTTGGAGGCG
CGGGATCCAAAAGCATTTTTTCACAGCCCTACGGGACTCCCGAGTGCAATCACGGGATGG
GAGGTACCCGACTTTTTTGAGCTTCAAGTTGATGGTACAACGACGAAGAAATGGGTCTTG
ATAGTCACACCAGCTAATGGCTCTCCGGCAACCGGAAATGGAGTATTTGGACTGACTGGG
TCGTTTGATGGTGCAGTATTTACTGCAGACCCAATTGACACCAGCACTCTCTGGTTAGAT
TATGGACGTGATTTTGATGGCGCCATGTCTTGGGAAAATGTCCCTGCATCAGATGGCCGT
AGGATCATCGCCGCCGTTGCGAACAGCTACGGTACAAATCCTCCAACGAATACTTGGAAA
GGCATGCTTTCATTCCCTCGCACGTTAAAGTTAAAACAGCTCAACGGCAAACTTCAGTTC
CTTCAGCTTCCTGTGAGTGAGCTAGACGCGACGGGTACGTCGCTTACAAAAATCACCAAT
CGAATCCTCGCTCCGGGTCAGTCCTTACTTGCGGATCTTCACGGAAAGGCGTTAGATATC
CGTCTAAACTTCATCCCGGCTGCTGGTTCTACCTTAAGCCTTGCCGTCCGTAAAGGAGGA
AATGAACAGACCCTAATCAAATACTCCCAATCGAGAACGGAACTTTCAGTCGACCGCAAC
GCAAGTGGGAATACCGGTTACGATCCTGCTGCAGGCGGAATTCACGTTGCCGCCCTTCAA
GCCGACTCCAACGGTGTGGTGCATGTGCGAGTCTTGGTCGACGAATGTTCGGTGGAAGTA
TACGGTGGAGAGGGCGAATCAGTGATCTCTGATCTTATTTTCCCTGCGGCCAGTTCCGAC
GGTCTTTCCTTAACTACGGATGGAGGTAACGTTGACTTGCGATCGGTGGAAGTGCGTGCA
ATTACAGTATTCTAG
119 changes: 119 additions & 0 deletions test/Botrytis/CHR215_genome.fasta
Original file line number Diff line number Diff line change
@@ -0,0 +1,119 @@
>BC1G_16003 | Botrytis cinerea (B05.10) predicted protein (218 nt)
ATGCCCAGGTCGGGAAGTCGTAAGTGCTTTAACGTCACACCGCTGACGATTCAGTTTCCC
GACGACGACGTACATTTCGACTGGGTAGTTTCATCGTTCACGTCAGAAAATTATTAGGTT
TCGGGAACGAGATTAACGCCAATGAATTTTTGGTTAGATGGTGCATGATGAACCTTCGGC
ATGAGAGCGATGTTATGAGGACAGAGGGACAGAATTGA
>BC1G_16004 | Botrytis cinerea (B05.10) predicted protein (298 nt)
ATGCGTATTCGGAAACCACAAACCTTCTGCCAGAAAGGACAAGGTTATTTCGCATCAATT
CACGCATCTGAACCGACGTAGGTCAGTGTTACCGGAACCATTTGATTCTGACTCAGAATC
GGATGATCCAGAAGTTCAATTGATTGCGTATATGGCAGAACCTTCCCGGAAGAGAGCTTG
TGCTGCTGTTGAGGATTCAGTTAACTATGATCCAGGAAACAAGCCCAGTAAGCCATCTGG
AGAACAGTCTGCTCGTGTTATTAGACAGTTACAGGAGATCTTAGATCGACAAGTCTAA
>BC1G_16005 | Botrytis cinerea (B05.10) predicted protein (636 nt)
ATGGTTGGAAGTATGAAGCAGGTTCAAGTAAGTGATTTCCTCGATTTCCCATTGCTATAT
TATCCAAGTTGATTTAAGACCTTAAACTAATTCTTTGCATTCACAGTATCGCTCTTCAGC
ATCCGCTAGCGTTCCTGTCGACTTTCGGTACTCGAATGCCACCACAATGCAAATGACCGT
TTCTTTATCTGACTGTGGGTATCACTTATCTGTGTCGAGGGTAGAGTGGTACTTTCAAGA
TGATATCATCCTTGCCGACTTGTGGTACTGGAATGCCACCAAAACACATCATCGATCTGT
GGCAGAAGGCCAATCCAGTGTTGGATTCTATGTATCACTTGTCTATCTCCCTGGGAGATG
CTGATAGAGGTGGAAAACCCTGTGCTAGTCCTTTTGCACTTGACGGTAAAGAATGATTTC
CTTCGGAACTGCCGAAAAAGATACATTCTTGCCGACTTGGCATTGATTACGGGATCCCAG
AAAGACTATCAGCCATATCCAGTCGGCTGGAACAGTCGCGACAAGTACCCGAATAACATC
GATGTCGTGGCCGGTAAAGCATCCCGAGCTGTCCCACTCACAGAACCATATCACCCTGGC
AATCAACCACCTCCTTGGTACCAGCAGCGATGGTAA
>BC1G_16006 | Botrytis cinerea (B05.10) predicted protein (682 nt)
ATGCTCTGTATAGTTTCTGTACTCACTGTTGCGCTCGCTGGCGGGGCATCAGCTTTCACA
CCACCTGGGTTTGAACCATCTTCAACTAATGATCTCACTGTCGCATATGGCTCTAAGCTT
GCAACAAATGGAATCCAAATGTTACGAGCCGGTAAGCTTCTTCCCCTTTCCCTAAGTTGT
ATCGGGACTGTATGCTAACAACTTTTCAGACACGGCCTATGCTCCTATTCTTGGTACAGC
CACAAAAATGAGCGGTACCTACGCAGTAATGATGGTTGATCCCGATATTCCACCCGCAAA
AGTGGGAGGTGATACATCACAATTTCTTCACTGGATGCAAGCCGATCTCACGTCGTCGAA
TACCACGACGACTATCGGAGGTCAAAAAATCTACGAACTGATCAACGTAAAGAACACATC
TGCATTCGCTACATATCTACAGCCAAATCCTCCAGACATTGCGCCAACTACTCATAGATA
TACTCAACTACTATTTAATACGACAGGTATGAACATGAGTCTAGCTTCACTTCAAACAGC
CGGAAAAACTAGAGGAAATTTCAATGCTACAAATGTAGTTAAAAGCGCAAAGCTGACAGT
TTTGATGGGGAACTCATTCGATGTTTCATTTGGAGATAAAGCGATAAATAATACAGGAGC
TTCAACAGGAAGTTCTACATAG
>BC1G_16007 | Botrytis cinerea (B05.10) predicted protein (304 nt)
ATGACCTTCCCGAAGCCACATTCTGCTGGCCATCTAGAAGCCATGCTCAACACTAAGATT
ACCACAAGATACAAACGTTGTGCAGGTGGTGGTGACCCCCCTAGACATGAAGAAGAACAG
GACGGGGCAAAGGAGTTAGAGTGCTTTCTCAAGACCCTGGTAAGTTGCATGAAAACCCTG
AATATAATAATATGGAGACTCGGACCCCCCCCCGGTCTTCCATTGACACAAAAACGGTTT
ATACAATAAGCGACAACATGGAATCCGATTTATCGCGGCATCAGAAATACGTGCTTTGTT
TTAG
>BC1G_16008 | Botrytis cinerea (B05.10) predicted protein (1093 nt)
ATGACTACTTCGTTGAACACAATCTCTGCACAAATGGTAATCGCTTTCGGAACTATGAAT
GGGGAGACTCTGCCGAGGTAAGCTTGAGTGATGCTGTAGGAGAGTAGGTTTATAGATTTA
CAGACATCCTGATAAGTTCTTCTTCATGGTTTTGCCAATGCCTACAAGGGATGAGAGATG
GGTTTGGATTGATGTTAGTATGCTCCTATCTTCCTATCTACTCACTTTCGGCCTTTCTAA
TTTTTCTTATACTGCAGCTGCTGGCACATGTTCGCGCTATATATATTCCAATCGCGTATT
CGGCATCAGAAGACTACCCGGACCTTAGTACTTGGGTGCAGATTAACTTCGCCAGAGATC
GAACCGTGCCCGTCTGGCACGCTGGTTCGGAGTTTGAGGATTATAAGACCGACAAGTTGA
CAGGTTTCGGCATAAAGAAGGATCGGACCCTTGGACTAGACTTCACCGGGCTTGTGGAGT
TGCTCAGTATTCCCCGTCAATTCCGCAAAGTTAACCCTTATTCAGGAAAGCTCATTAGAA
TTGTTCCTGACAATTGGGTGAAGACGGTGTCAGTGAGCAAGTCTTACAGAGATGCCGATG
ATATTAGTTGGCTAGCTATCCAGAAAGCTCATAACAGGGTTGACTTGATGTGGAAGTCTG
TCGAAAAAACTTTCTGGATAGAAAATTTCACCAAGAATGCAATGGTGTTCGCTATTGGGT
GGATCCCTGGCCCAGGTCCCTTTATGGCCATTGCATTCTCCCTGACTTGGACTGCAATCA
AAGATGAGGAGGCATTCTGGAATGAACTTAGCCTCTGGGCCCCCGGAGTTCAGTTTACGC
AATCATTTGGGAAGACATGAAGAAGGGCTTTGCTGAGATAAGGGAGTCATTTATTGACCC
GAGTTGGCTTGCCTCGGGGAAGGAGGTGAACGTTGGGAAGCTCAACGCTAAGCCCTAACC
CGTGGTTAAGGTGATCCTGGATGAAGCTAAGAAGGTTGAGAAGGAAACCAAGGTAGGGAA
ACCTCCGGAAGGCGAGAAGGTTGATGACCCAGACGGAGGAATGGTTCTTGGAGTTGCCGA
AGCAGAAGAATAA
>BC1G_16009 | Botrytis cinerea (B05.10) hypothetical protein similar to SirI (1584 nt)
ATGGTTAACTCTGTTCCCATTGAGGACAGTGGTCTCTCTGCACGTTCGCGCCCTAAGGTA
GCAGCATTTATACCGGTGCTAAAAAATGTTGACAAGAACTTTGCGGTTGGGTCAGAAATT
GATGTGGATATGGCCATTGGCGAGAATTGGCTTATCCGACAGCCATTGATTGGCATATTC
AAAAAGGCTCTTAAAGATATCGCCGAGAAGGTATGAGATTCTCAAGCGTGCTGGCGGCTT
ATTTGCCAACAGGCGTCCTATTTATCCGCCTTATACATACAATATCCAAACTAATTGCCA
ATGCTATCAAGGATCTCAACTATCCTCTTGGAGTAGGTGGACCTGCTCAAGTACTTGCTG
CTTTCGCCTCGTTCTTCAACCAGTTTTTTTCTCCGTCCATTCCAATCGAGCCAGATCATG
TAGTTACTTTCTCCGGTGCAAGTACATGCCTGGATGGCTTGCTCTATGCAATCTGTGATG
AAGGGGATAGCATTATCCTACCGTCACCTTTTTGGGGTAGGCTTTTTCTTTTCATGTTTC
TTTTCCGTCGGAGTCATACCTATGCTAAATTTCTACACGTGGACCACTCTGACAAGAACT
AGCCGGCTATGTTCCATTTACCAAGTTTCGCGTCGATGTCAATATTGTCACCACGACAGA
TATTCCATGGCGTTCTACCACATCTATCGATATTGTCGCTGCGGTAAAGAAAGCATACTT
CAGTGCACAAGACACCACGCGAATCAAGGCATTGCTTATGGCCAATCCACACAATCCGAC
TGGACACTGCTACTCCGCATCTGTGATCCGTGAGCTGATGGTGTTCTGTAAAGACAATGG
ATTGCATTATATATCGGATGAGATATTTGCTATGTCTTCTTTCAGAAGAGAGGAAGAGGG
CCAGTTTACCTCCACACTTTCACTCATTAGTGACAATAAAGAAAGCCCTATGGATCCGAG
TCGTCTACATGTGATCTACAGCATGAGTAAAGACTGGGGATCACCAGGTCTAAGAATGGT
AAGTTGTCAAAAAAATTCTTGCTGTTGCTTTTCGCCCACTTTTACTCCTCAACACTTTAC
CCATGTTCCTTCAGATGTTCTTTTCTGATGAAGCTTCAGGCCTGCCTCGTTTCTCCACGT
AATCGTCCTGTTCTCGAAGGCAGTTGGATCTCCAACTACATGCAGACGTCCAATCTAAAT
AATCTTTGTGTCATGGCTCTCTTCCACTCTCCCAGCCTTCCATCTATTATTAATTCTCTC
AAACATCAACTCACACGTAACTACGGATGGCTTACGGAAGCACTGAATAGATGGGAGATC
GAATACATACCTACTCATGCTGGATTTCATGTCTTTGCAAGGTTAGCTAAAAATGCGCAA
AGTTGGGGCGATGAAGCTGCAGTTGTTAAACAATTATTTGATGCAGGTGTCATGGTGGTT
CCTGGCAAGAATTTCGGAGGTGTTGATGGAGAATTCGGCTGGGTTCGTCTATCGTTCTCA
ATTGAAGAGAAGAAATTGCGGGATGGATTATGGAGAATTGGGCAGACTTTAGGCTTCGAA
AGCAATAGGGAAAGGATTCAATAG
>BC1G_16010 | Botrytis cinerea (B05.10) beta-fructosidase (1569 nt)
ATGACCATCAGTACCAGTCCTGTTAGCACCACGGCTACTATCAGCACTACACTAAGTACA
ACATCTCGAGCCAGCCCAACTCCCGCGGCTCCTTATGACTTTCGTCCGACGTATCATTTT
GTTCCTGACCAGAATTGGATGAATGAGCCCAACGGACTTATCAAAATTGGCTCTACGTGG
CACCTGTTTTTCCAACACAACCCTACAGGCAATTTCTGGGGTAATATAAACTGGGGGCAT
GCAACCAGCACCGACCTCATAAACTGGGTCCATAAACCAGTTGCCATCTCGGACGCGGAC
GGTATTCAGGCTTTTACTGGGACTTCATATTACGATCCATCAAATCTATCAGGACTAGGG
ACGAGTGTAAATCCGCCGTATTTGGCTTTCTTTACCGGATATTTTTCTTCAAGCGGAGTT
CAGGATCAACGACTTGCATACAGCTTAGATCAAGGGACGACCTGGACAAAGTACTCGGGT
AATCCAATCGTATCACAACAACAAGAGTCACCGCATGATGTAACCAAAGGTTTGGAGGCG
CGGGATCCAAAAGCATTTTTTCACAGCCCTACGGGTAAGTGGGTAATGATTCTGGCGCAT
GGGGGGCAGAACAAGGTGACATTTTGGACGTCTCCCGATGCAAAGTCTTGGACCTGGAAA
AGTGACTTCACTTCTGCTAATATCCCAGGACTCCCGAGTGCAATCACGGGATGGGAGGTA
CCCGACTTTTTTGAGCTTCAAGTTGATGGTACAACGACGAAGAAATGGGTCTTGATAGTC
ACACCAGCTAATGGCTCTCCGGCAACCGGAAATGGAGTATTTGGACTGACTGGGTCGTTT
GATGGTGCAGTATTTACTGCAGACCCAATTGACACCAGCACTCTCTGGTTAGATTATGGA
CGTGATTTTGATGGCGCCATGTCTTGGGAAAATGTCCCTGCATCAGATGGCCGTAGGATC
ATCGCCGCCGTTGCGAACAGCTACGGTACAAATCCTCCAACGAATACTTGGAAAGGCATG
CTTTCATTCCCTCGCACGTTAAAGTTAAAACAGCTCAACGGCAAACTTCAGTTCCTTCAG
CTTCCTGTGAGTGAGCTAGACGCGACGGGTACGTCGCTTACAAAAATCACCAATCGAATC
CTCGCTCCGGGTCAGTCCTTACTTGCGGATCTTCACGGAAAGGCGTTAGATATCCGTCTA
AACTTCATCCCGGCTGCTGGTTCTACCTTAAGCCTTGCCGTCCGTAAAGGAGGAAATGAA
CAGACCCTAATCAAATACTCCCAATCGAGAACGGAACTTTCAGTCGACCGCAACGCAAGT
GGGAATACCGGTTACGATCCTGCTGCAGGCGGAATTCACGTTGCCGCCCTTCAAGCCGAC
TCCAACGGTGTGGTGCATGTGCGAGTCTTGGTCGACGAATGTTCGGTGGAAGTATACGGT
GGAGAGGGCGAATCAGTGATCTCTGATCTTATTTTCCCTGCGGCCAGTTCCGACGGTCTT
TCCTTAACTACGGATGGAGGTAACGTTGACTTGCGATCGGTGGAAGTGCGTGCAATTACA
GTATTCTAG
43 changes: 43 additions & 0 deletions test/Botrytis/CHR215_prot.fa
Original file line number Diff line number Diff line change
@@ -0,0 +1,43 @@
>BC1T_16003 | BC1G_16003 | Botrytis cinerea (B05.10) predicted protein (61 aa)
MPRSGSLSRRRRTFRLGSFIVHVRKLLGFGNEINANEFLVRWCMMNLRHESDVMRTEGQN
*
>BC1T_16004 | BC1G_16004 | Botrytis cinerea (B05.10) predicted protein (70 aa)
MRIRKPQTFCQKGQEVQLIAYMAEPSRKRACAAVEDSVNYDPGNKPSKPSGEQSARVIRQ
LQEILDRQV*
>BC1T_16005 | BC1G_16005 | Botrytis cinerea (B05.10) predicted protein (132 aa)
MVGSMKQVQYRSSASASVPVDFRYSNATTMQMTVSLSDCGYHLSVSRVEWYFQDDIILAD
LWYWNATKTHHRSVAEGQSSKDYQPYPVGWNSRDKYPNNIDVVAGKASRAVPLTEPYHPG
NQPPPWYQQRW*
>BC1T_16006 | BC1G_16006 | Botrytis cinerea (B05.10) predicted protein (208 aa)
MLCIVSVLTVALAGGASAFTPPGFEPSSTNDLTVAYGSKLATNGIQMLRADTAYAPILGT
ATKMSGTYAVMMVDPDIPPAKVGGDTSQFLHWMQADLTSSNTTTTIGGQKIYELINVKNT
SAFATYLQPNPPDIAPTTHRYTQLLFNTTGMNMSLASLQTAGKTRGNFNATNVVKSAKLT
VLMGNSFDVSFGDKAINNTGASTGSST*
>BC1T_16007 | BC1G_16007 | Botrytis cinerea (B05.10) predicted protein (71 aa)
MTFPKPHSAGHLEAMLNTKITTRYKRCAGGGDPPRHEEEQDGAKELECFLKTLRQHGIRF
IAASEIRALF*
>BC1T_16008 | BC1G_16008 | Botrytis cinerea (B05.10) predicted protein (267 aa)
MTTSLNTISAQMVIAFGTMNGETLPRHPDKFFFMVLPMPTRDERWVWIDLLAHVRAIYIP
IAYSASEDYPDLSTWVQINFARDRTVPVWHAGSEFEDYKTDKLTGFGIKKDRTLGLDFTG
LVELLSIPRQFRKVNPYSGKLIRIVPDNWVKTVWLAIQKAHNRVDLMWKSVEKTFWIENF
TKNAMVFAIGWIPGPGPFMAIAFSLTWTAIKDEEAFWNELSLWAPGVILDEAKKVEKETK
VGKPPEGEKVDDPDGGMVLGVAEAEE*
>BC1T_16009 | BC1G_16009 | Botrytis cinerea (B05.10) hypothetical protein similar to SirI (432 aa)
MVNSVPIEDSGLSARSRPKVAAFIPVLKNVDKNFAVGSEIDVDMAIGENWLIRQPLIGIF
KKALKDIAEKDLNYPLGVGGPAQVLAAFASFFNQFFSPSIPIEPDHVVTFSGASTCLDGL
LYAICDEGDSIILPSPFWAGYVPFTKFRVDVNIVTTTDIPWRSTTSIDIVAAVKKAYFSA
QDTTRIKALLMANPHNPTGHCYSASVIRELMVFCKDNGLHYISDEIFAMSSFRREEEGQF
TSTLSLISDNKESPMDPSRLHVIYSMSKDWGSPGLRMACLVSPRNRPVLEGSWISNYMQT
SNLNNLCVMALFHSPSLPSIINSLKHQLTRNYGWLTEALNRWEIEYIPTHAGFHVFARLA
KNAQSWGDEAAVVKQLFDAGVMVVPGKNFGGVDGEFGWVRLSFSIEEKKLRDGLWRIGQT
LGFESNRERIQ*
>BC1T_16010 | BC1G_16010 | Botrytis cinerea (B05.10) beta-fructosidase (485 aa)
MTISTSPVSTTATISTTLSTTSRASPTPAAPYDFRPTYHFVPDQNWMNEPNGLIKIGSTW
HLFFQHNPTGNFWGNINWGHATSTDLINWVHKPVAISDADGIQAFTGTSYYDPSNLSGLG
TSVNPPYLAFFTGYFSSSGVQDQRLAYSLDQGTTWTKYSGNPIVSQQQESPHDVTKGLEA
RDPKAFFHSPTGLPSAITGWEVPDFFELQVDGTTTKKWVLIVTPANGSPATGNGVFGLTG
SFDGAVFTADPIDTSTLWLDYGRDFDGAMSWENVPASDGRRIIAAVANSYGTNPPTNTWK
GMLSFPRTLKLKQLNGKLQFLQLPVSELDATGTSLTKITNRILAPGQSLLADLHGKALDI
RLNFIPAAGSTLSLAVRKGGNEQTLIKYSQSRTELSVDRNASGNTGYDPAAGGIHVAALQ
ADSNGVVHVRVLVDECSVEVYGGEGESVISDLIFPAASSDGLSLTTDGGNVDLRSVEVRA
ITVF*
Loading

0 comments on commit 74a334c

Please sign in to comment.