Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

T54A refactoring #77

Merged
merged 61 commits into from
Jan 31, 2024
+1,109 −627
Merged

T54A refactoring #77

Changes from 2 commits
Commits
Show all changes
61 commits
Select commit Hold shift + click to select a range
879271f
Dummy change to test 2T6S pipeline on CI with rectified results data
bclenet Aug 25, 2023
b306fe4
[T54A] refactoring
bclenet Aug 29, 2023
e8ec3ae
[TEST] test updates for T54A pipeline
bclenet Aug 29, 2023
0a4eadd
Remove changes on 2T6S
bclenet Aug 29, 2023
69fd60b
[TEST] change pipeline test_utils to avoid having to rewrite it at ev…
bclenet Aug 29, 2023
6640ca3
[CI] from now on, unit_test workflow must run on self hosted runner
bclenet Aug 29, 2023
89a2d68
[BUG] Cleaning connections
bclenet Aug 29, 2023
f9c7ab0
[TEST] test_conftest was not supposed to belong to this branch
bclenet Aug 30, 2023
582a024
Wildcard to create parameters dir
bclenet Aug 30, 2023
5eaac52
Set default file type for FSL
bclenet Aug 31, 2023
d8dce40
Merge branch 'main' into T54A-refactoring
bclenet Aug 31, 2023
6986e90
[BUG] inside unit_tests workflow
bclenet Aug 31, 2023
d6e67f3
Merge branch 'Inria-Empenn:main' into main
bclenet Aug 31, 2023
0de5e0f
Merge branch 'main' into T54A-refactoring
bclenet Aug 31, 2023
c3bfc53
Merge branch 'Inria-Empenn:main' into main
bclenet Sep 4, 2023
4389d7d
Merge branch 'main' into T54A-refactoring
bclenet Sep 4, 2023
4b30504
Merge branch 'Inria-Empenn:main' into main
bclenet Sep 19, 2023
fd15ffc
Merge branch 'Inria-Empenn:main' into main
bclenet Sep 21, 2023
6ebe5d2
Merge branch 'Inria-Empenn:main' into main
bclenet Sep 29, 2023
0a584dd
Merge branch 'Inria-Empenn:main' into main
bclenet Sep 29, 2023
e284b80
Merge branch 'Inria-Empenn:main' into main
bclenet Sep 29, 2023
96d24e9
Merge branch 'main' into T54A-refactoring
bclenet Sep 29, 2023
7f17446
Use computed masks
bclenet Sep 29, 2023
442295b
Bug with output folder names
bclenet Oct 3, 2023
5774813
Merge branch 'Inria-Empenn:main' into main
bclenet Oct 5, 2023
8f12d3d
Merge branch 'Inria-Empenn:main' into main
bclenet Oct 5, 2023
57b0b7a
Merge branch 'main' into T54A-refactoring
bclenet Oct 5, 2023
3353a6d
PEP8 related refac
bclenet Oct 5, 2023
6eed291
Issue with contrasts ids
bclenet Oct 6, 2023
f4713fd
Run level outputs
bclenet Oct 9, 2023
91dc744
Merge branch 'Inria-Empenn:main' into main
bclenet Oct 10, 2023
0afb963
Merge branch 'main' into T54A-refactoring
bclenet Nov 16, 2023
c295046
[REFAC] refactoring T54A + adding groups to MultipleRegressDesign [sk…
bclenet Nov 16, 2023
3d96719
[TEST] adding unit tests for T54A [skip ci]
bclenet Nov 16, 2023
ae6178e
Removed get_contrasts method to write run level contrasts as class at…
bclenet Nov 17, 2023
c03e9d1
Merge branch 'Inria-Empenn:main' into main
bclenet Nov 20, 2023
e52d02d
Merge branch 'main' into T54A-refactoring
bclenet Nov 20, 2023
57d2151
[REFAC] end of refactoring T54A [TEST] end of unit_tests for T54A
bclenet Nov 20, 2023
d2f267a
Dealing with subjects selection in SelectFiles Nodes
bclenet Nov 20, 2023
73173fa
[REFAC] group level : better identify groups
bclenet Nov 21, 2023
50d329d
[BUG] with participants ids [skip ci]
bclenet Nov 22, 2023
fe0d25b
Merge branch 'Inria-Empenn:main' into main
bclenet Nov 22, 2023
04d5ff2
Merge branch 'Inria-Empenn:main' into main
bclenet Nov 22, 2023
2fd6542
Dummy commit to run CI
bclenet Dec 21, 2023
c9ee889
Merge branch 'Inria-Empenn:main' into main
bclenet Jan 5, 2024
9bfc89c
Merge branch 'Inria-Empenn:main' into main
bclenet Jan 10, 2024
7493f74
Merge branch 'Inria-Empenn:main' into main
bclenet Jan 11, 2024
a73f3c3
[DATALAD] change results url
bclenet Jan 11, 2024
f03f50e
Merge pull request #3 from bclenet/results
bclenet Jan 11, 2024
be0c977
Merge branch 'main' into T54A-refactoring
bclenet Jan 17, 2024
26599bd
[BUG] session information
bclenet Jan 18, 2024
fcc95d4
[BUG] session information
bclenet Jan 18, 2024
33f125b
Correct value for fractional intensity threshold
bclenet Jan 18, 2024
e3f9ab3
Run level contrast file
bclenet Jan 23, 2024
52f2491
Merge run level masks for FLAMEo
bclenet Jan 24, 2024
d811961
Merge branch 'main' into T54A-refactoring
bclenet Jan 25, 2024
dcc9c79
Merge branch 'main' into T54A-refactoring
bclenet Jan 26, 2024
23898e1
T54A conditional removing files [skip ci]
bclenet Jan 26, 2024
9ed7ddd
[SRC][TEST] level outputs & mask intersection for group level analysis
bclenet Jan 30, 2024
c76464e
Merge branch 'main' into T54A-refactoring
bclenet Jan 30, 2024
2aacae4
helper for testing pipeline outputs [skip ci]
bclenet Jan 31, 2024
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view

These merge commits were added into this branch cleanly.

There are no new changes to show.