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T54A refactoring#77

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bclenet merged 61 commits intoInria-Empenn:mainInria-Empenn/narps_open_pipelines:mainfrom bclenet:T54A-refactoringbclenet/narps_open_pipelines:T54A-refactoringCopy head branch name to clipboardJan 31, 2024

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Commits on Aug 25, 2023

• Dummy change to test 2T6S pipeline on CI with rectified results data

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Commits on Aug 29, 2023

• [T54A] refactoring

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• [TEST] test updates for T54A pipeline

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• Remove changes on 2T6S

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• [TEST] change pipeline test_utils to avoid having to rewrite it at every repro

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• [CI] from now on, unit_test workflow must run on self hosted runner

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• [BUG] Cleaning connections

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Commits on Aug 30, 2023

• [TEST] test_conftest was not supposed to belong to this branch

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• Wildcard to create parameters dir

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Commits on Aug 31, 2023

• Set default file type for FSL

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• Merge branch 'main' into T54A-refactoring

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• [BUG] inside unit_tests workflow

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• Merge branch 'Inria-Empenn:main' into main

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• Merge branch 'main' into T54A-refactoring

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Commits on Sep 4, 2023

• Merge branch 'Inria-Empenn:main' into main

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• Merge branch 'main' into T54A-refactoring

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Commits on Sep 19, 2023

• Merge branch 'Inria-Empenn:main' into main

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Commits on Sep 21, 2023

• Merge branch 'Inria-Empenn:main' into main

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Commits on Sep 29, 2023

• Merge branch 'Inria-Empenn:main' into main

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• Merge branch 'Inria-Empenn:main' into main

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• Merge branch 'Inria-Empenn:main' into main

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• Merge branch 'main' into T54A-refactoring

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• Use computed masks

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Commits on Oct 3, 2023

• Bug with output folder names

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Commits on Oct 5, 2023

• Merge branch 'Inria-Empenn:main' into main

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• Merge branch 'Inria-Empenn:main' into main

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• Merge branch 'main' into T54A-refactoring

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• PEP8 related refac

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Commits on Oct 6, 2023

• Issue with contrasts ids

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Commits on Oct 9, 2023

• Run level outputs

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Commits on Oct 10, 2023

• Merge branch 'Inria-Empenn:main' into main

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Commits on Nov 16, 2023

• Merge branch 'main' into T54A-refactoring

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• [REFAC] refactoring T54A + adding groups to MultipleRegressDesign [skip ci]

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• [TEST] adding unit tests for T54A [skip ci]

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Commits on Nov 17, 2023

• Removed get_contrasts method to write run level contrasts as class attributes instead [skip ci]

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Commits on Nov 20, 2023

• Merge branch 'Inria-Empenn:main' into main

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• Merge branch 'main' into T54A-refactoring

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• [REFAC] end of refactoring T54A [TEST] end of unit_tests for T54A

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• Dealing with subjects selection in SelectFiles Nodes

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Commits on Nov 21, 2023

• [REFAC] group level : better identify groups

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Commits on Nov 22, 2023

• [BUG] with participants ids [skip ci]

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• Merge branch 'Inria-Empenn:main' into main

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• Merge branch 'Inria-Empenn:main' into main

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Commits on Dec 21, 2023

• Dummy commit to run CI

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Commits on Jan 5, 2024

• Merge branch 'Inria-Empenn:main' into main

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Commits on Jan 10, 2024

• Merge branch 'Inria-Empenn:main' into main

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Commits on Jan 11, 2024

• Merge branch 'Inria-Empenn:main' into main

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• [DATALAD] change results url

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• Merge pull request #3 from bclenet/results

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Commits on Jan 17, 2024

• Merge branch 'main' into T54A-refactoring

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Commits on Jan 18, 2024

• [BUG] session information

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• [BUG] session information

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• Correct value for fractional intensity threshold

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Commits on Jan 23, 2024

• Run level contrast file

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Commits on Jan 24, 2024

• Merge run level masks for FLAMEo

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Commits on Jan 25, 2024

• Merge branch 'main' into T54A-refactoring

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Commits on Jan 26, 2024

• Merge branch 'main' into T54A-refactoring

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• T54A conditional removing files [skip ci]

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Commits on Jan 30, 2024

• [SRC][TEST] level outputs & mask intersection for group level analysis

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• Merge branch 'main' into T54A-refactoring

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Commits on Jan 31, 2024

• helper for testing pipeline outputs [skip ci]

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