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Hotfix for
chip.subsample_reads
bug.This bug was introduced in v1.2.2 (6/13/2019).
chip.ctl_subsample_reads
is ignored andchip.subsample_reads
(0: disabled by default) is used for subsampling both experiment replicates and controls.Outputs are affected by this bug if
chip.subsample_reads
is non-zero andchip.pipeline_type
istf
(default) orhistone
.Since
chip.subsample_reads
is 0 (disabled) by default, outputs are not affected if you used a default set of parameters.The following outputs can be affected by this bug: