Deprecate pkg_resources and Docker updates

4.11.2 (2024-12-10)

Changed

• Updated Dockerfile to use Python 3.12

Fixed

• Deprecate pkg_resources
• Healthcheck of MariaDB container in docker-compose.yml

Include cryptography dependency

4.11.1 (2024-06-05)

Fixed

• Added cryptography module among the dependencies

Removed alchy dependency and use index in genes report query

4.11 (2024-05-23)

Changed

• Removed alchy dependency

Fixed

• Timeout when creating genes overview due to slow transcript_stat query

Fix timeout when creating report due to slow transcript_stat query

4.10.2 (2023-08-16)

Fixed

• Timeout when creating report due to slow transcript_stat query

PyPi automation fix

4.10.1 (2023-03-10)

Fixed

• Fix GitHub Actions PyPi automation

v4.10

Added

• Documentation for Docker demo build

Fixed

• Update from deprecated Ubuntu base image for the PyPi build publish flow

Babel fix, Docker envs and less explicit session storage

4.9.4 (2023-03-06)

Changed

• Remove one more use of GET and flask session storage to avoid overloading the session cookie

Fixed

• Use virtual environment and multi-stage build in Dockerfile
• Babel object has no attribute localeselector error at startup

[v4.9.3] Alchemy Flask interaction

4.9.3 (2022-04-26)

Changed

• Install requirements from requirements file parsed in setup.py

Fixed

• Error launching the app due to LocalStack.__ident_func__ missing in werkzeug >= 2.1.x

Fix app crashing with unsupported gene IDs in the report endpoint

4.9.2 (2022-02-07)

Fixed

• App crashing when unsupported gene IDs are provided in the report endpoint

Fix multisample PDF reports and demo containers data import

4.9.1 (2022-01-20)

Fixed

• Typo in Makefile preventing loading of demodata
• Multisample PDF reports