Fix IndexError of the previous fix for 7nt7

wwPDB · Apr 3, 2024 · 4b531c0 · 4b531c0
1 parent d0b9bce
commit 4b531c0
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Showing 7 changed files with 21 additions and 0 deletions.
diff --git a/wwpdb/utils/nmr/mr/AriaMRParserListener.py b/wwpdb/utils/nmr/mr/AriaMRParserListener.py
@@ -587,6 +587,9 @@ def exitAria_mr(self, ctx: AriaMRParser.Aria_mrContext):  # pylint: disable=unus
                                                       if sa['ref_chain_id'] == ref_chain_id
                                                       and sa['test_chain_id'] == test_chain_id)
 
+                                            if len(sa['test_seq_id']) != len(sa['ref_seq_id']):
+                                                continue
+
                                             poly_seq_model = next(ps for ps in self.__polySeq
                                                                   if ps['auth_chain_id'] == ref_chain_id)
 

diff --git a/wwpdb/utils/nmr/mr/BiosymMRParserListener.py b/wwpdb/utils/nmr/mr/BiosymMRParserListener.py
@@ -596,6 +596,9 @@ def exitBiosym_mr(self, ctx: BiosymMRParser.Biosym_mrContext):  # pylint: disabl
                                                       if sa['ref_chain_id'] == ref_chain_id
                                                       and sa['test_chain_id'] == test_chain_id)
 
+                                            if len(sa['test_seq_id']) != len(sa['ref_seq_id']):
+                                                continue
+
                                             poly_seq_model = next(ps for ps in self.__polySeq
                                                                   if ps['auth_chain_id'] == ref_chain_id)
 

diff --git a/wwpdb/utils/nmr/mr/CyanaMRParserListener.py b/wwpdb/utils/nmr/mr/CyanaMRParserListener.py
@@ -761,6 +761,9 @@ def exitCyana_mr(self, ctx: CyanaMRParser.Cyana_mrContext):  # pylint: disable=u
                                                       if sa['ref_chain_id'] == ref_chain_id
                                                       and sa['test_chain_id'] == test_chain_id)
 
+                                            if len(sa['test_seq_id']) != len(sa['ref_seq_id']):
+                                                continue
+
                                             poly_seq_model = next(ps for ps in self.__polySeq
                                                                   if ps['auth_chain_id'] == ref_chain_id)
 

diff --git a/wwpdb/utils/nmr/mr/DynamoMRParserListener.py b/wwpdb/utils/nmr/mr/DynamoMRParserListener.py
@@ -640,6 +640,9 @@ def exitDynamo_mr(self, ctx: DynamoMRParser.Dynamo_mrContext):  # pylint: disabl
                                                       if sa['ref_chain_id'] == ref_chain_id
                                                       and sa['test_chain_id'] == test_chain_id)
 
+                                            if len(sa['test_seq_id']) != len(sa['ref_seq_id']):
+                                                continue
+
                                             poly_seq_model = next(ps for ps in self.__polySeq
                                                                   if ps['auth_chain_id'] == ref_chain_id)
 

diff --git a/wwpdb/utils/nmr/mr/IsdMRParserListener.py b/wwpdb/utils/nmr/mr/IsdMRParserListener.py
@@ -570,6 +570,9 @@ def exitIsd_mr(self, ctx: IsdMRParser.Isd_mrContext):  # pylint: disable=unused-
                                                       if sa['ref_chain_id'] == ref_chain_id
                                                       and sa['test_chain_id'] == test_chain_id)
 
+                                            if len(sa['test_seq_id']) != len(sa['ref_seq_id']):
+                                                continue
+
                                             poly_seq_model = next(ps for ps in self.__polySeq
                                                                   if ps['auth_chain_id'] == ref_chain_id)
 

diff --git a/wwpdb/utils/nmr/mr/RosettaMRParserListener.py b/wwpdb/utils/nmr/mr/RosettaMRParserListener.py
@@ -677,6 +677,9 @@ def exitRosetta_mr(self, ctx: RosettaMRParser.Rosetta_mrContext):  # pylint: dis
                                                       if sa['ref_chain_id'] == ref_chain_id
                                                       and sa['test_chain_id'] == test_chain_id)
 
+                                            if len(sa['test_seq_id']) != len(sa['ref_seq_id']):
+                                                continue
+
                                             poly_seq_model = next(ps for ps in self.__polySeq
                                                                   if ps['auth_chain_id'] == ref_chain_id)
 

diff --git a/wwpdb/utils/nmr/mr/SybylMRParserListener.py b/wwpdb/utils/nmr/mr/SybylMRParserListener.py
@@ -570,6 +570,9 @@ def exitSybyl_mr(self, ctx: SybylMRParser.Sybyl_mrContext):  # pylint: disable=u
                                                       if sa['ref_chain_id'] == ref_chain_id
                                                       and sa['test_chain_id'] == test_chain_id)
 
+                                            if len(sa['test_seq_id']) != len(sa['ref_seq_id']):
+                                                continue
+
                                             poly_seq_model = next(ps for ps in self.__polySeq
                                                                   if ps['auth_chain_id'] == ref_chain_id)