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Merge pull request #28 from wwPDB/DAOTHER-9379
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Added table for pdbx_modification_feature category
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wmorellato authored Aug 29, 2024
2 parents 6d19b37 + cfe32b3 commit 8e2fca5
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Original file line number Diff line number Diff line change
Expand Up @@ -98,6 +98,7 @@ def __setup(self):
# ('citation','Primary citation','column-wise'),
("pdbx_validate_close_contact", "Close contacts", "row-wise"),
("pdbx_validate_symm_contact", "Close symmetry contacts", "row-wise"),
("pdbx_modification_feature", "PCM", "row-wise"),
# ('symmetry', 'Symmetry', 'row-wise'),
# ('cell', 'Cell constants', 'row-wise'),
# ('exptl_crystal_grow', 'Crystallization details', 'row-wise'),
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29 changes: 29 additions & 0 deletions wwpdb/apps/ann_tasks_v2/report/styles/ModelReport.py
Original file line number Diff line number Diff line change
Expand Up @@ -133,6 +133,7 @@ class PdbxReportCategoryStyle(PdbxCategoryStyleBase):
("pdbx_struct_assembly_depositor_info", "table"),
("entity_branch_list", "table"),
("pdbx_struct_ref_seq_depositor_info", "table"),
("pdbx_modification_feature", "table"),
]
_cDict = {
"audit_contact_author": [
Expand Down Expand Up @@ -1328,6 +1329,34 @@ class PdbxReportCategoryStyle(PdbxCategoryStyleBase):
("_pdbx_struct_ref_seq_depositor_info.seq_align_begin", "%s", "str", ""),
("_pdbx_struct_ref_seq_depositor_info.seq_align_end", "%s", "str", ""),
],
"pdbx_modification_feature": [
("_pdbx_modification_feature.ordinal", "%s", "str", ""),
("_pdbx_modification_feature.label_comp_id", "%s", "str", ""),
("_pdbx_modification_feature.label_asym_id", "%s", "str", ""),
("_pdbx_modification_feature.label_seq_id", "%s", "str", ""),
("_pdbx_modification_feature.label_alt_id", "%s", "str", ""),
("_pdbx_modification_feature.modified_residue_label_comp_id", "%s", "str", ""),
("_pdbx_modification_feature.modified_residue_label_asym_id", "%s", "str", ""),
("_pdbx_modification_feature.modified_residue_label_seq_id", "%s", "str", ""),
("_pdbx_modification_feature.modified_residue_label_alt_id", "%s", "str", ""),
("_pdbx_modification_feature.auth_comp_id", "%s", "str", ""),
("_pdbx_modification_feature.auth_asym_id", "%s", "str", ""),
("_pdbx_modification_feature.auth_seq_id", "%s", "str", ""),
("_pdbx_modification_feature.PDB_ins_code", "%s", "str", ""),
("_pdbx_modification_feature.symmetry", "%s", "str", ""),
("_pdbx_modification_feature.modified_residue_auth_comp_id", "%s", "str", ""),
("_pdbx_modification_feature.modified_residue_auth_asym_id", "%s", "str", ""),
("_pdbx_modification_feature.modified_residue_auth_seq_id", "%s", "str", ""),
("_pdbx_modification_feature.modified_residue_PDB_ins_code", "%s", "str", ""),
("_pdbx_modification_feature.modified_residue_symmetry", "%s", "str", ""),
("_pdbx_modification_feature.comp_id_linking_atom", "%s", "str", ""),
("_pdbx_modification_feature.modified_residue_id_linking_atom", "%s", "str", ""),
("_pdbx_modification_feature.modified_residue_id", "%s", "str", ""),
("_pdbx_modification_feature.ref_pcm_id", "%s", "str", ""),
("_pdbx_modification_feature.ref_comp_id", "%s", "str", ""),
("_pdbx_modification_feature.type", "%s", "str", ""),
("_pdbx_modification_feature.category", "%s", "str", ""),
]
}

_excludeList = []
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