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Updated README
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jonrkarr committed Feb 29, 2016
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# WholeCell Summer School
#### COMBINE-compliant implementation of the *Mycoplasma genitalium* whole-cell model

The primary aim is to learn about standards for modelling and simulation in computational biology. But a secondary aim is to enjoy modelling, coding and diagramming the whole-cell model using openly available software and COMBINE standards.
The goal of this project was to recode the [*Mycoplasma genitalium* whole-cell model](http://www.ncbi.nlm.nih.gov/pubmed/22817898) into COMBINE-compliant standards to faciliate interpretation, reuse, and extension of the model, as well as to help researchers build additional whole-cell models.

This repository puts together all modules of the "whole-cell model" published in [Cell](http://www.ncbi.nlm.nih.gov/pubmed/22817898) by Karr *et al.*.
This project was a part of the [2015 Whole-Cell Modeling Summer School](https://sites.google.com/site/vwwholecellsummerschool/) which aim to teach students about whole-cell modeling and systems biology standards.

This repository includes recoded versions of all of the submodels of the *Mycoplasma genitalium* model.

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