Updates to reaktoro defaults and inclusion of exclusion options #88

Job	Run time
Check code is formatted (Black)	8s
pytest (linux/3.9/dev)	3m 12s
pytest (win64/3.9/dev)	15m 47s
pytest (linux/3.10/dev)	3m 12s
pytest (win64/3.10/dev)	15m 42s
pytest (linux/3.11/dev)	3m 36s
pytest (win64/3.11/dev)	15m 7s
pytest (linux/3.12/dev)	3m 12s
pytest (win64/3.12/dev)	14m 6s
	1h 14m 2s

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