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wangjr03 authored Apr 23, 2024
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# FLAMINGO: **F**ast **L**ow-r**A**nk **M**atrix completion algorithm for reconstruct**IN**g high-resolution 3D **G**enome **O**rganizations

# FLAMINGOrLite
Lite version of FLAMINGO, high-resolution 3D chromosome structures reconstruction based on Hi-C.

https://github.com/JiaxinYangJX/FLAMINGOrLite/

## Differences between FLAMINGOrLite and FLAMINGOr
1. FLAMINGOrLite doesn't support iFLAMINGO
2. FLAMINGOrLite is faster and more memory-efficient
3. FLAMINGOrLite is more user-friendly and fixed bugs in FLAMINGOr


## Gallery
**The 3D structures for chromosome 1-4 in 5-kb resolution** in GM12878. The 3D structures for all 23 chromosomes could be found [here](https://docs.google.com/presentation/d/1dJXx5xVuXCd9MYfpq8AJwn1UPTieAgFbcdfJlnd8AbI/edit?usp=sharing). <br>

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