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Update SCENIC submodule #143

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merged 1 commit into from
Feb 28, 2020
Merged

Update SCENIC submodule #143

merged 1 commit into from
Feb 28, 2020

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cflerin
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@cflerin cflerin commented Feb 28, 2020

Updates to SCENIC module for pySCENIC 0.10.0:

  • Updated to a new grn inference script, allows the use of grnboost2 or genie3
  • Implement the use of a fixed seed in the AUCell step (further work for Set a fixed seed for all steps #43 ).
  • Updated all container links to aertslab/pyscenic:0.10.0

@cflerin cflerin merged commit 263cf78 into develop Feb 28, 2020
@cflerin cflerin deleted the pyscenic_updates branch February 28, 2020 09:54
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