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Curated Prostate Cancer Data R-package / pipelines / workspaces

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output
github_document
knitr::opts_chunk$set(
  collapse = TRUE,
  fig.path = "man/figures/README-",
  out.width = "100%"
)

curatedPCaData

Overview

curatedPCaData is a collection of publically available and annotated data resources concerning prostate cancer.

Installation

You can install curatedPCaData from github with:

# install.packages("devtools")
devtools::install_github("Syksy/curatedPCaData")

Usage


library(curatedPCaData)


curatedPCaData::mae_tcga

curatedPCaData::mae_tcga[["gex"]][1:4,1:4]
curatedPCaData::mae_tcga[["cna"]][1:4,1:4]
MultiAssayExperiment::colData(curatedPCaData::mae_tcga)[1:3,1:5]


curatedPCaData::mae_taylor
curatedPCaData::mae_sun

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