travis check

.travis.yml

@@ -3,10 +3,10 @@ language: python
 python:
   - "2.7"
 
-#cache:
-#  apt: true
-#  directories:
-#    - $HOME/miniconda
+cache:
+  apt: true
+  directories:
+    - $HOME/miniconda
 
 before_install:
   # install miniconda for Python dependencies
@@ -27,16 +27,12 @@ install:
   - wget https://cran.r-project.org/src/contrib/RobustRankAggreg_1.1.tar.gz
   - R CMD INSTALL RobustRankAggreg_1.1.tar.gz
   - python setup.py develop
-#  - pip install --upgrade .
   - python setup.py build
 #  - pip install nose coverage
 #  - pip install coveralls
 # # command to run tests, e.g. python setup.py test
 script:  
-  - python test/test_cluster.py
-  - $HOME/miniconda/bin/python test/test_cluster.py
   - python run_tests.py
-  - $HOME/miniconda/bin/python test/test_cluster.py
 
 
 #after_sucess:

gimmemotifs/comparison.py

@@ -105,7 +105,6 @@ def _load_scores(self):
                 for combine in ["mean"]:
                     self.scoredist[metric]["%s_%s" % (match, combine)] = {}
                     score_file = os.path.join(self.config.get_score_dir(), "%s_%s_%s_score_dist.txt" % (match, metric, combine))
-                    logging.warn(score_file)
                     if os.path.exists(score_file):
                         for line in open(score_file):
                             l1, l2, m, sd = line.strip().split("\t")[:4]