Fixup FHIR compliance; add missing resource nesting

uwcirg · Nov 18, 2024 · fc989d8 · fc989d8
1 parent 53f852e
commit fc989d8
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/script_facade/models/r1/bundle.py b/script_facade/models/r1/bundle.py
@@ -1,7 +1,7 @@
 def as_bundle(fhir_resources, bundle_type='collection'):
     entries = []
     for fhir_resource in fhir_resources:
-        entries.append(fhir_resource)
+        entries.append({"resource": fhir_resource})
 
     bundle_fhir = {
         "resourceType": 'Bundle',

diff --git a/script_facade/rxnav/transcode.py b/script_facade/rxnav/transcode.py
@@ -34,7 +34,7 @@ def add_rxnorm_coding(medication_order_bundle, rxnav_url):
     """Add rxnorm codings to each MedicationOrder in given FHIR bundle"""
     medication_order_bundle = medication_order_bundle.copy()
     for medication_order in medication_order_bundle['entry']:
-        medication = medication_order['medicationCodeableConcept']
+        medication = medication_order['resource']['medicationCodeableConcept']
         rxnorm_codings = []
         for coding in medication['coding']:
             # skip non-NDC codings