update memory for fasta_stats

this is not multithreaded and it runs out of memory for large inputs
usegalaxy-au · Dec 2, 2024 · f734929 · f734929
1 parent b79cefe
commit f734929
Showing 1 changed file with 1 addition and 7 deletions.
diff --git a/files/galaxy/dynamic_job_rules/production/total_perspective_vortex/tools.yml b/files/galaxy/dynamic_job_rules/production/total_perspective_vortex/tools.yml
@@ -1560,13 +1560,7 @@ tools:
     params:
       singularity_enabled: true
   toolshed.g2.bx.psu.edu/repos/iuc/fasta_stats/fasta-stats/.*:
-    cores: 3
-    mem: 11.5
-    rules:
-    - id: fasta-stats_small_input_rule
-      if: input_size < 0.01
-      cores: 1
-      mem: 3.8
+    mem: min(3 * input_size + 2, 40)
   toolshed.g2.bx.psu.edu/repos/iuc/fastani/fastani/.*:
     params:
       singularity_enabled: true