Merge pull request #1720 from TomHarrop/helixer

helixer rules
usegalaxy-au · Jan 16, 2024 · eb577e1 · eb577e1
2 parents 9236612 + 0c57701
commit eb577e1
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diff --git a/files/galaxy/dynamic_job_rules/production/total_perspective_vortex/tools.yml b/files/galaxy/dynamic_job_rules/production/total_perspective_vortex/tools.yml
@@ -3059,3 +3059,15 @@ tools:
     mem: 24.0
     params:
       singularity_enabled: true
+  toolshed.g2.bx.psu.edu/repos/genouest/helixer/helixer/*:
+    context:
+      partition: azuregpu0
+    cores: 8
+    mem: 69
+    params:
+      docker_enabled: true
+      docker_run_extra_arguments: --gpus all
+    scheduling:
+      require:
+      - pulsar
+      - pulsar-azure-gpu
diff --git a/jenkins/update_labels/tool_labels.yml b/jenkins/update_labels/tool_labels.yml
@@ -6,6 +6,8 @@ deprecated:
 - toolshed.g2.bx.psu.edu/repos/devteam/cuffnorm/cuffnorm/*
 - toolshed.g2.bx.psu.edu/repos/devteam/cuffmerge/cuffmerge/*
 - toolshed.g2.bx.psu.edu/repos/devteam/cuffcompare/cuffcompare/*
+test:
+- toolshed.g2.bx.psu.edu/repos/genouest/helixer/helixer/*
 training-only:
 - toolshed.g2.bx.psu.edu/repos/simon-gladman/velvetoptimiser/velvet/*
 - toolshed.g2.bx.psu.edu/repos/devteam/velvet/velvetg/*