Merge pull request #1709 from mthang/update_local_tool_conf

add entry to local_tool_conf.xml
usegalaxy-au · Jan 15, 2024 · 3965ac2 · 3965ac2
2 parents 91d28e2 + 3734ece
commit 3965ac2
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Showing 2 changed files with 6 additions and 3 deletions.
diff --git a/files/galaxy/config/local_tool_conf.xml b/files/galaxy/config/local_tool_conf.xml
@@ -5,7 +5,10 @@
         <tool file="/mnt/galaxy/local_tools/maxquant/maxquant.xml" labels="test"/>
         <tool file="/mnt/galaxy/local_tools/alphafold-test/alphafold.xml" labels="test"/>
         <tool file="/mnt/galaxy/local_tools/gtdbtk/gtdbtk_classify_wf.xml" labels="test"/>
-        <tool file="/mnt/galaxy/local_tools/fgenesh/fgenesh.xml" labels="test"/>
+	<tool file="/mnt/galaxy/local_tools/fgenesh/fgenesh.xml" labels="test"/>
+	<tool file="/mnt/galaxy/local_tools/fgenesh/fgenesh_annotate.xml" labels="test"/>
+	<tool file="/mnt/galaxy/local_tools/fgenesh/fgenesh_split.xml" labels="test"/>
+	<tool file="/mnt/galaxy/local_tools/fgenesh/fgenesh_merge.xml" labels="test"/>
         <tool file="/mnt/galaxy/local_tools/cellranger/cellranger.xml" labels="test"/>
     </section>
     <section id="interactivetools" name="Interactive Tools">

diff --git a/files/galaxy/dynamic_job_rules/production/total_perspective_vortex/tools.yml b/files/galaxy/dynamic_job_rules/production/total_perspective_vortex/tools.yml
@@ -2970,8 +2970,8 @@ tools:
       fail: Your account has not been given access to cellranger. Contact [email protected]
         if you think this is in error.
   fgenesh:
-    cores: 24
-    mem: 12
+    cores: 120
+    mem: 20
     params:
       singularity_enabled: true
     scheduling: