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Notebooks #656

Merged
merged 29 commits into from
Nov 20, 2024
Merged

Notebooks #656

merged 29 commits into from
Nov 20, 2024

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maddenp-noaa
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Synopsis

Merge notebooks branch to main.

Type

  • Enhancement (adds new functionality)

Impact

  • This is a non-breaking change (existing functionality continues to work as expected)

Checklist

  • I have added myself and any co-authors to the PR's Assignees list.
  • I have reviewed the documentation and have made any updates necessitated by this change.

Byrnetp and others added 19 commits June 13, 2024 15:03
We are adding an example Jupyter notebook to test using a pull request.
Adds a unit testing file to test the example Jupyter notebook using testbook
Creates a make target for testing notebooks
Adds cells to the notebook that demonstrate writing a file to disk by rendering a template and yaml files to facilitate this
Adds cells to the notebook that include cell magics
* update_values() -> update_from() (#578)

* DRY out Driver._validate() (#579)

* Move execute() to its own API namespace, disambiguate (#580)

* Config classes to API (#582)

* Simplify unknown-extension error message (#584)

* UW-657 fs makedirs (#572)

* Docstring cleanup (#585)

* GH 586 bad stdin_ok prompt (#587)

* Fix issue with creating a metatask dep. (#589)

The rocoto schema is set up to allow metataskdep entries in the YAML, but the logic was not included in the tool to handle them. This addition fixes that.

* Add --show-schema support to drivers (#588)

* add file system notebook, unit tests, binder links

* Add missing newlines

* Add a table of contents

* Makefile and .gitignore changes from review

* Apply suggestions from code review

Co-authored-by: Paul Madden <[email protected]>

* Apply review suggestions to all sections of the notebook

* Specific rmtree() targeting and output cell test update

* Apply suggestions from code review

Co-authored-by: Paul Madden <[email protected]>

---------

Co-authored-by: Paul Madden <[email protected]>
Co-authored-by: Christina Holt <[email protected]>
* WIP

* WIP

* WIP

* Add config notebook, unit tests, Binder link & button

* add newline

* add markdown comment

* add suggestions from review

* apply suggestion from review

* updating markdown comments and RtD links

* Apply suggestions from code review

Co-authored-by: Paul Madden <[email protected]>

* change error demo style and update section links

* Apply suggestions from review

* update testing

* update RtD links and add uwtools version

---------

Co-authored-by: Paul Madden <[email protected]>
* update_values() -> update_from() (#578)

* DRY out Driver._validate() (#579)

* Move execute() to its own API namespace, disambiguate (#580)

* Config classes to API (#582)

* Simplify unknown-extension error message (#584)

* UW-657 fs makedirs (#572)

* Docstring cleanup (#585)

* GH 586 bad stdin_ok prompt (#587)

* Fix issue with creating a metatask dep. (#589)

The rocoto schema is set up to allow metataskdep entries in the YAML, but the logic was not included in the tool to handle them. This addition fixes that.

* Add --show-schema support to drivers (#588)

* Config notebook p2 and example notebook removal

* removing merge diff text

* pin python version for RtD

* improvements from code review

* add config.compare() format mismatch example

* Remove typo

Co-authored-by: Emily Carpenter <[email protected]>

---------

Co-authored-by: Paul Madden <[email protected]>
Co-authored-by: Christina Holt <[email protected]>
Co-authored-by: Emily Carpenter <[email protected]>
* Rocoto notebook, tests, and links

* Apply suggestions from code review

Co-authored-by: NaureenBharwaniNOAA <[email protected]>

* Apply suggestions from code review

Co-authored-by: Paul Madden <[email protected]>
Co-authored-by: Christina Holt <[email protected]>

* Changes from review

* Update notebooks/rocoto.ipynb

schemas typo fix

Co-authored-by: Emily Carpenter <[email protected]>

* cyclestring markdown change

* Remove unnecessary logger mentions

* Add nested metatask example

* Apply suggestions from code review

Co-authored-by: Paul Madden <[email protected]>

* Move nesting example to the end of metatask section

---------

Co-authored-by: NaureenBharwaniNOAA <[email protected]>
Co-authored-by: Paul Madden <[email protected]>
Co-authored-by: Christina Holt <[email protected]>
Co-authored-by: Emily Carpenter <[email protected]>
* Add notebook, unit tests, Binder link

* Apply suggestions from code review

Co-authored-by: Christina Holt <[email protected]>

* Add user.PARMdir

* Apply suggestions from code review

Co-authored-by: Christina Holt <[email protected]>

* Update Binder links

* Add validation example using chgres_cube driver

* Move header to binder_links.rst

* Apply suggestions from review

* Apply suggestions from code review

Co-authored-by: Paul Madden <[email protected]>

* notebook name change and driver validation update

---------

Co-authored-by: Christina Holt <[email protected]>
Co-authored-by: Paul Madden <[email protected]>
@maddenp-noaa maddenp-noaa merged commit 8ab5515 into main Nov 20, 2024
2 checks passed
@maddenp-noaa maddenp-noaa deleted the notebooks branch November 20, 2024 00:14
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4 participants