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Update Module8_Lab.md
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fmgcavalli authored Jun 6, 2019
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Expand Up @@ -124,15 +124,16 @@ An easy way to figure out the number of reads is to make use of the command ‘w
cd $RNA_LAB/fasta/
head carcinoma_C02_read1.fasta
```
```
> HWUSI-EAS230-R:2:88:885:1584#0/1
GCTCTTCGGTTCTTTCCTTCTTCAAGTGGTATGCTC
> HWUSI-EAS230-R:2:15:691:382#0/1
> HWUSI-EAS230-R:2:15:691:382#0/1
GGATTTTGACAAATCCTTATCTCCGGCCACCCCATA
> HWUSI-EAS230-R:2:52:111:1052#0/1
GCTGGAAAGCCACCAAGATGCTGACATTGAAGACTT
> HWUSI-EAS230-R:2:28:1640:236#0/1
> HWUSI-EAS230-R:2:28:1640:236#0/1
CTCTGAGACGTCACCAAGTGCGGCGCCGGCAGCCTG

```

Running this command only gives you 2 x read number (*note: replace `YourFastaFile.fasta` with the actual name of a fasta file*):
```
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