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docs: Add example of writing companion files using ome-types #277

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merged 2 commits into from
Jan 19, 2025

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@sbesson sbesson commented Jan 8, 2025

See ome/ome-model#194

Initially illustrates the example of a single multi-Z, multi-T, multi-C image with one TIFF file per timepoint using the raw fluorescence images from idr0052 as the source (https://doi.org/10.17867/10000123a).

After downloading the raw TIFF files using the link provided, the cell0005_R0001.companion.ome should be readable by any software with OME-TIFF support e.g. ImageJ/Fiji via Bio-Formats, OMERO or others

Illustrate the example of a single multi-Z, multi-T, multi-C image
with one TIFF file per timepoint using the raw fluorescence images
from idr0052 as the source (https://doi.org/10.17867/10000123a).
@tlambert03 tlambert03 changed the title Add example of writing companion files using ome-types docs: Add example of writing companion files using ome-types Jan 19, 2025
@tlambert03 tlambert03 added the documentation Improvements or additions to documentation label Jan 19, 2025
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codecov bot commented Jan 19, 2025

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 86.52%. Comparing base (f8822fa) to head (e7eb3b1).
Report is 1 commits behind head on main.

Additional details and impacted files
@@           Coverage Diff           @@
##             main     #277   +/-   ##
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  Coverage   86.52%   86.52%           
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  Files          25       25           
  Lines        1247     1247           
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  Hits         1079     1079           
  Misses        168      168           

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thanks @sbesson! Looks great. sorry for the delay

@tlambert03 tlambert03 merged commit 13f3f88 into tlambert03:main Jan 19, 2025
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codspeed-hq bot commented Jan 19, 2025

CodSpeed Performance Report

Merging #277 will not alter performance

Comparing sbesson:companion_writing_example (e7eb3b1) with main (f8822fa)

Summary

✅ 9 untouched benchmarks

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