ipynb to py using jupytext #341
Workflow file for this run
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| name: tests | |
| on: | |
| pull_request: | |
| branches: | |
| - main | |
| push: | |
| branches: | |
| - main | |
| env: | |
| CACHE_NUMBER: 0 # increase to reset cache manually | |
| jobs: | |
| run-pytests: | |
| if: | | |
| github.event_name == 'push' || | |
| github.event.pull_request.draft == false | |
| strategy: | |
| matrix: | |
| include: | |
| - os: windows-latest | |
| label: win-64 | |
| prefix: C:\Miniconda3\envs\my-env | |
| name: ${{ matrix.label }} | |
| runs-on: ${{ matrix.os }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Setup miniconda | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| miniconda-version: "latest" | |
| activate-environment: my-env | |
| - name: Set cache date | |
| run: echo "DATE=$(date +'%Y%m%d')" >> $GITHUB_ENV | |
| - uses: actions/cache@v4 | |
| with: | |
| path: ${{ matrix.prefix }} | |
| key: ${{ matrix.label }}-conda-${{ hashFiles('envs\environment_test.yml') }}-${{ env.CACHE_NUMBER }} | |
| id: cache | |
| - name: Update environment | |
| if: steps.cache.outputs.cache-hit != 'true' | |
| run: conda env update -n my-env -f envs\environment_test.yml | |
| - name: Install hhnk-research_tools | |
| shell: pwsh | |
| run: pip install git+https://github.com/HHNK/hhnk-research-tools.git@main | |
| - name: Test | |
| shell: pwsh | |
| run: | | |
| conda info | |
| conda list | |
| pip install -e . | |
| pytest --cov-report term-missing --cov=hhnk_threedi_tools --cov-report=xml tests/ | |
| - name: Upload coverage | |
| uses: codecov/codecov-action@v5 | |
| #Hopefully reduces run time; see https://github.com/conda-incubator/setup-miniconda/issues/277 | |
| #This worked in conda-incubator/setup-miniconda@v2, but not on conda-incubator/setup-miniconda@v3 | |
| # - name: Rename conda package cache | |
| # if: steps.cache.outputs.cache-hit != 'true' #Doesnt work when cache is used. | |
| # shell: bash | |
| # run: mv "${CONDA_PKGS_DIR}" "${CONDA_PKGS_DIR}_do_not_cache" | |
| # fail_if_pull_request_is_draft: | |
| # if: github.event.pull_request.draft == true | |
| # runs-on: windows-latest | |
| # steps: | |
| # - name: Fails in order to indicate that pull request needs to be marked as ready to review and unit tests workflow needs to pass. | |
| # run: exit 1 |