add linux libraries to runner environment when os is linux

.github/workflows/build_ci.yml

@@ -93,6 +93,7 @@ jobs:
             # Otherwise core dumped in github actions
             test_args: |
               sudo apt install xvfb libxkbcommon-x11-0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 libxcb-xinerama0 libxcb-xfixes0
+              sudo apt-get install libglapi-mesa libegl-mesa0 libegl1 libopengl0 libgl1-mesa-glx
               sudo Xvfb :1 -screen 0 1024x768x24 </dev/null &
               export DISPLAY=":1"
               pytest tests -k 'not exclude_from_linux_pip_test'

.github/workflows/build_manual.yml

@@ -95,9 +95,45 @@ jobs:
           conda build .conda_mac --output-folder build
           echo "BUILD_PATH=$(pwd)/build" >> "$GITHUB_ENV"
 
-      # Test built conda package (Ubuntu and Windows)
-      - name: Test built conda package (Ubuntu and Windows)
-        if: matrix.os != 'macos-14'
+      # Test built conda package (Ubuntu)
+      - name: Test built conda package (Ubuntu)
+        if: matrix.os == 'ubuntu-22.04'
+        shell: bash -l {0}
+        run: |
+          echo "Current build path: $BUILD_PATH"
+          conda deactivate
+    
+          echo "Python executable before activating environment:"
+          which python
+          echo "Python version before activating environment:"
+          python --version
+          echo "Conda info before activating environment:"
+          conda info
+
+          echo "Creating and testing conda environment with sleap package..."
+          sudo apt-get update
+          sudo apt-get install libglapi-mesa libegl-mesa0 libegl1 libopengl0 libgl1-mesa-glx
+          conda create -y -n sleap_test -c file://$BUILD_PATH -c sleap/label/dev -c conda-forge -c nvidia -c anaconda sleap
+          conda activate sleap_test
+
+          echo "Python executable after activating sleap_test environment:"
+          which python
+          echo "Python version after activating sleap_test environment:"
+          python --version
+          echo "Conda info after activating sleap_test environment:"
+          conda info
+          echo "List of installed conda packages in the sleap_test environment:"
+          conda list
+          echo "List of installed pip packages in the sleap_test environment:"
+          pip list
+
+          echo "Testing sleap package installation..."
+          sleap_version=$(python -c "import sleap; print(sleap.__version__)")
+          echo "Test completed using sleap version: $sleap_version"
+
+      # Test built conda package (Windows)
+      - name: Test built conda package (Windows)
+        if: matrix.os == 'windows-2022'
         shell: bash -l {0}
         run: |
           echo "Current build path: $BUILD_PATH"

.github/workflows/ci.yml

@@ -62,6 +62,13 @@ jobs:
       - name: Checkout repo
         uses: actions/checkout@v4
 
+      - name: Add Linux libraries
+        if: matrix.os == 'ubuntu-22.04'
+        # https://github.com/conda-forge/opencv-feedstock/issues/401#issue-2196393732
+        run: |
+          sudo apt-get update
+          sudo apt-get install -y libgl1-mesa-glx
+
       - name: Setup Conda
         uses: conda-incubator/[email protected]
         with: