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shrivaths16 committed Dec 20, 2023
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2 changes: 1 addition & 1 deletion develop/CODE_OF_CONDUCT.html
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</ul>
</li>
<li class="toctree-l1"><a class="reference internal" href="datasets.html">Datasets</a></li>
<li class="toctree-l1"><a class="reference internal" href="bulletin.html">Bulletin</a></li>
<li class="toctree-l1"><a class="reference internal" href="bulletin.html">What's new</a></li>
<li class="toctree-l1"><a class="reference external" href="https://github.com/talmolab/sleap">GitHub</a></li>
<li class="toctree-l1"><a class="reference external" href="https://github.com/talmolab/sleap/releases">Releases</a></li>
<li class="toctree-l1"><a class="reference internal" href="help.html">Help</a></li>
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2 changes: 1 addition & 1 deletion develop/CONTRIBUTING.html
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</ul>
</li>
<li class="toctree-l1"><a class="reference internal" href="datasets.html">Datasets</a></li>
<li class="toctree-l1"><a class="reference internal" href="bulletin.html">Bulletin</a></li>
<li class="toctree-l1"><a class="reference internal" href="bulletin.html">What's new</a></li>
<li class="toctree-l1"><a class="reference external" href="https://github.com/talmolab/sleap">GitHub</a></li>
<li class="toctree-l1"><a class="reference external" href="https://github.com/talmolab/sleap/releases">Releases</a></li>
<li class="toctree-l1"><a class="reference internal" href="help.html">Help</a></li>
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26 changes: 13 additions & 13 deletions develop/_sources/api.rst
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sleap.message
sleap.skeleton
sleap.util
sleap.info.align
sleap.info.feature_suggestions
sleap.info.labels
sleap.info.metrics
sleap.info.summary
sleap.info.trackcleaner
sleap.info.write_tracking_h5
sleap.nn.callbacks
sleap.nn.evals
sleap.nn.heads
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sleap.nn.training
sleap.nn.utils
sleap.nn.viz
sleap.nn.config.data
sleap.nn.config.model
sleap.nn.config.optimization
sleap.nn.config.outputs
sleap.nn.config.training_job
sleap.nn.config.utils
sleap.nn.data.augmentation
sleap.nn.data.confidence_maps
sleap.nn.data.dataset_ops
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sleap.nn.data.resizing
sleap.nn.data.training
sleap.nn.data.utils
sleap.nn.config.data
sleap.nn.config.model
sleap.nn.config.optimization
sleap.nn.config.outputs
sleap.nn.config.training_job
sleap.nn.config.utils
sleap.nn.architectures.common
sleap.nn.architectures.encoder_decoder
sleap.nn.architectures.hourglass
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sleap.io.format.nix
sleap.io.format.sleap_analysis
sleap.io.format.text
sleap.info.align
sleap.info.feature_suggestions
sleap.info.labels
sleap.info.metrics
sleap.info.summary
sleap.info.trackcleaner
sleap.info.write_tracking_h5
61 changes: 56 additions & 5 deletions develop/_sources/bulletin.md
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# Bulletin
# What's New?

## SLEAP v1.3.3

_mm/dd/yyyy_

This is a brown-bag release following insufficient restrictions on allowable `tensorflow` versions for the "pypi" extra `sleap[pypi]` in 1.3.2. While the conda packages for 1.3.2 were not affected (since `tensorflow` is pulled in from anaconda), the PyPI only package installed via `pip install sleap[pypi]` had conflicts between the version of `tensorflow` and the version of `keras`. See [1.3.0](https://github.com/talmolab/sleap/releases/tag/v1.3.0), [1.3.1](https://github.com/talmolab/sleap/releases/tag/v1.3.1), and [1.3.2](https://github.com/talmolab/sleap/releases/tag/v1.3.2) for previous notable changes.

###### From 1.3.2+, to install SLEAP through pip use `pip install sleap[pypi]` to ensure all dependencies are gathered.

As a reminder:

> The 1.3.1 dependency update requires [Mamba](https://mamba.readthedocs.io/en/latest/index.html) for faster dependency resolution. If you already have anaconda installed, then you _can_ set the solver to libmamba in the base environment:
>```
>conda update -n base conda
>conda install -n base conda-libmamba-solver
>conda config --set solver libmamba
>```
>Any subsequent `mamba` commands in the docs will need to be replaced with `conda` if you choose to use your existing Anaconda installation.
>
>Otherwise, follow the [recommended installation instruction for Mamba](https://mamba.readthedocs.io/en/latest/installation.html).
### Quick install
**`mamba` (Windows/Linux/GPU)**:
```
mamba create -y -n sleap -c conda-forge -c nvidia -c sleap -c anaconda sleap=1.3.3
```
**`mamba` (Mac)**:
```
mamba create -y -n sleap -c conda-forge -c anaconda -c sleap sleap=1.3.3
```
**`pip` (any OS except Apple Silicon)**:
```
pip install sleap[pypi]==1.3.3
```
### Full Changelog
##### Fixes
* Do not try to remove item if already deleted by @roomrys in https://github.com/talmolab/sleap/pull/1498
* Set `LD_LIBRARY_PATH` on mamba activate by @roomrys in https://github.com/talmolab/sleap/pull/1496
* Reset `LD_LIBRARY_PATH` on deactivate by @roomrys in #1502
##### Dependencies
* Add version restirctions to tendorflow for pypi by @roomrys in #1485
* Remove `imageio` pin by @roomrys in #1501
**Full Changelog**: https://github.com/talmolab/sleap/compare/v1.3.2...v1.3.3
---
## SLEAP v1.3.2
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### Full Changelog
#### Enhancements
##### Enhancements
* Add option to remove videos in batch by @gitttt-1234 in https://github.com/talmolab/sleap/pull/1382 and https://github.com/talmolab/sleap/pull/1406
* Add `Track` when add `Instance` by @roomrys in https://github.com/talmolab/sleap/pull/1408
* Add `Video` to cache when adding `Track` by @roomrys in https://github.com/talmolab/sleap/pull/1407
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* Add Option to Export CSV by @gitttt-1234 in https://github.com/talmolab/sleap/pull/1438
* Limit max tracks via track-local queues by @shrivaths16 and @talmo in https://github.com/talmolab/sleap/pull/1447
#### Fixes
##### Fixes
* Minor fix in computation of OKS by @shrivaths16 in https://github.com/talmolab/sleap/pull/1383 and https://github.com/talmolab/sleap/pull/1399
* Fix `Filedialog` to work across (mac)OS by @roomrys in https://github.com/talmolab/sleap/pull/1393
* Fix panning bounding box by @gitttt-1234 in https://github.com/talmolab/sleap/pull/1398
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* Add model folder to the unzip path by @roomrys in https://github.com/talmolab/sleap/pull/1445
* Fix drag and drop by @talmo in https://github.com/talmolab/sleap/pull/1449
#### Dependencies
##### Dependencies
* Pin micromamba version by @roomrys in https://github.com/talmolab/sleap/pull/1376
* Add pip extras by @roomrys in https://github.com/talmolab/sleap/pull/1481
#### New Contributors
##### New Contributors
* @shrivaths16 made their first contribution in https://github.com/talmolab/sleap/pull/1383
* @gitttt-1234 made their first contribution in https://github.com/talmolab/sleap/pull/1382
* @KevinZ0217 made their first contribution in https://github.com/talmolab/sleap/pull/1414
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2 changes: 1 addition & 1 deletion develop/_sources/index.rst
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notebooks/index
Developer API <api>
datasets
bulletin
What's new <bulletin.md>
GitHub <https://github.com/talmolab/sleap>
Releases <https://github.com/talmolab/sleap/releases>
help
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