Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Add multiple dicot pipeline #71

Merged
merged 12 commits into from
Mar 31, 2024
Merged

Add multiple dicot pipeline #71

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
12 commits
Select commit Hold shift + click to select a range
de7853d
Add multiple dicot pipeline
eberrigan Mar 27, 2024
da510f6
Black
eberrigan Mar 27, 2024
77dd182
Fetch LFS files during CI
eberrigan Mar 27, 2024
513584f
Lint
eberrigan Mar 27, 2024
b9aed23
Lint
eberrigan Mar 27, 2024
253ea6b
Add batch processing per group
eberrigan Mar 28, 2024
57071f6
Return NaN filled arrays for root widths as default
eberrigan Mar 28, 2024
a738c2b
Add notebook for testing
eberrigan Mar 29, 2024
eb99831
Changes to notebook
eberrigan Mar 30, 2024
9bc5e18
Return NaNs as default in root widths
eberrigan Mar 30, 2024
bc12818
Compute grouped summaries for multiple dicots
eberrigan Mar 30, 2024
40fc672
Add output directory for group trait files
eberrigan Mar 31, 2024
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
3 changes: 3 additions & 0 deletions .gitattributes
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -0,0 +1,3 @@
*.h5 filter=lfs diff=lfs merge=lfs -text
*.slp filter=lfs diff=lfs merge=lfs -text
*.type filter=lfs diff=lfs merge=lfs -text
2 changes: 2 additions & 0 deletions .github/workflows/ci.yml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -66,6 +66,8 @@ jobs:
steps:
- name: Checkout repo
uses: actions/checkout@v3
with:
lfs: true # Fetch large files with Git LFS

- name: Setup Micromamba
# https://github.com/mamba-org/setup-micromamba
Expand Down
Loading
Loading