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Bugfixes (mostly for ARM compatibility) and long read test data #40

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@mbeavitt mbeavitt commented Dec 5, 2024

This pull request is mainly for stability and compatibility related changes. Additionally, some minimal long read test data was added to 'example'.

List of changes:

  • Fixed compiler error as a result of missing return value in IsGCRich function in alignments.hpp
  • Initialised 'k' variable to zero in vote.cpp, which was causing a crash on AArch64 machines
  • Added minimal long read test data
  • Specified char noncanonStrandInfo in FindJunction.cpp as signed, which fixed silent nonsense data from junc on AArch64 machines

Additional details can be found in the commit comments and PRs in my fork!

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mbeavitt commented Dec 5, 2024

CC @mourisl

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