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Update publications.bib
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crsl4 authored Jan 3, 2024
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@ARTICLE{Kong2023-jy,
title = "Unsupervised Learning of Phylogenetic Trees via
{Split-Weight} Embedding",
author = "Kong, Yibo and Tiley, George P and Solis-Lemus, Claudia",
abstract = "Unsupervised learning has become a staple in classical
machine learning, successfully identifying clustering
patterns in data across a broad range of domain
applications. Surprisingly, despite its accuracy and elegant
simplicity, unsupervised learning has not been sufficiently
exploited in the realm of phylogenetic tree inference. The
main reason for the delay in adoption of unsupervised
learning in phylogenetics is the lack of a meaningful, yet
simple, way of embedding phylogenetic trees into a vector
space. Here, we propose the simple yet powerful split-weight
embedding which allows us to fit standard clustering
algorithms to the space of phylogenetic trees. We show that
our split-weight embedded clustering is able to recover
meaningful evolutionary relationships in simulated and real
(Adansonia baobabs) data.",
month = dec,
year = 2023,
archivePrefix = "arXiv",
primaryClass = "q-bio.PE",
eprint = "2312.16074"
}


@ARTICLE{Tiley2023-wn,
title = "Extracting diamonds: Identifiability of 4-node cycles in level-1
phylogenetic networks under a pseudolikelihood coalescent model",
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