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crsl4 committed Nov 2, 2023
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@ARTICLE{Tiley2023-wn,
title = "Extracting diamonds: Identifiability of 4-node cycles in level-1
phylogenetic networks under a pseudolikelihood coalescent model",
author = "Tiley, George and Sol{\'\i}s-Lemus, Claudia",
abstract = "Here, we investigate the (generic) identifiability of the
position of the hybrid node in a 4-node hybridi z ation cycle in
a semi-directed level-1 phylogenetic network. While generic
identifiability is easily attained under non-restrictive
assumptions such as t $\in$ (0, $\infty$) for all branches and
$\gamma$ $\in$ (0, 1) for the inheritance probability of the
hybrid edges, simulations show that accurate detection of these
cycles can be complicated by inadequate sampling, small sample si
z e or gene tree estimation error. We identify practical advice
for evolutionary biologists on best sampling strategies to
improve the detection of this type of hybridi z ation cycle.
\#\#\# Competing Interest Statement The authors have declared no
competing interest.",
journal = "bioRxiv",
pages = "2023.10.25.564087",
month = oct,
year = 2023,
language = "en"
}


@ARTICLE{Justison2023-tc,
title = "{SiPhyNetwork}: An {R} package for simulating phylogenetic
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