Fix overwriting

smoia · Oct 14, 2021 · 7b34ed3 · 7b34ed3
1 parent b70039c
commit 7b34ed3
Show file tree

Hide file tree

Showing 3 changed files with 3 additions and 3 deletions.
diff --git a/00.pipelines/custom/cvr_pressure_preproc.sh b/00.pipelines/custom/cvr_pressure_preproc.sh
@@ -302,4 +302,4 @@ echo "***      Preproc COMPLETE!       ***"
 echo "************************************"
 echo "************************************"
 
-if [[ ${debug} == "yes" ]]; then set +x; fi #else rm -rf ${tmp}; fi
+if [[ ${debug} == "yes" ]]; then set +x; else rm -rf ${tmp}; fi
diff --git a/98.hcp/run_cvr_pressure_preproc.sh b/98.hcp/run_cvr_pressure_preproc.sh
@@ -20,4 +20,4 @@ singularity exec -e --no-home \
 			-B /bcbl/home/public/PJMASK_2/EuskalIBUR_preproc:/scripts \
 			-B /export/home/smoia/scratch:/tmp \
 			/bcbl/home/public/PJMASK_2/euskalibur.sif /scripts/00.pipelines/custom/cvr_pressure_preproc.sh \
-						-sub $1 -ses $2 -wdr /data -prjname cvr_pressure -tmp /tmp -overwrite
+						-sub $1 -ses $2 -wdr /data -prjname cvr_pressure -tmp /tmp
diff --git a/98.hcp/run_ica_denoise_preproc.sh b/98.hcp/run_ica_denoise_preproc.sh
@@ -20,4 +20,4 @@ singularity exec -e --no-home \
 			-B /bcbl/home/public/PJMASK_2/EuskalIBUR_preproc:/scripts \
 			-B /export/home/smoia/scratch:/tmp \
 			/bcbl/home/public/PJMASK_2/euskalibur.sif /scripts/00.pipelines/custom/ica_denoise_preproc.sh \
-						-sub $1 -ses $2 -wdr /data -prjname ica_denoise -tmp /tmp -overwrite
+						-sub $1 -ses $2 -wdr /data -prjname ica_denoise -tmp /tmp