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Edit_opt/bin_out.c

@@ -0,0 +1,68 @@
+#include<stdio.h> 
+#include <string.h>
+#include <ctype.h>
+#include<stdlib.h>
+main() 
+{ 
+    int i, n=2; 
+    char ch;
+    //char str[81]="AATATTACAGAAAAATCCCCACAAAAATCacctaaacataaaaatattctacttttcaacaataataCATAAACATATTG";
+    char *str = NULL;
+	size_t len = 0;
+	ssize_t read;
+
+    FILE *fp = fopen("samp_inp.txt", "r");
+
+    FILE *fptr = fopen("samp_bin.bin", "wb"); 
+    if (fptr == NULL) 
+    { 
+        printf("Could not open file"); 
+        return 0; 
+    }
+
+    while((read=getline(&str, &len, fp))!=-1)
+    {
+    for(i=0;i<=strlen(str);i++)
+    {
+        ch = toupper(str[i]);
+        switch(ch)
+        {
+            case 'A':
+                fprintf(fptr,"00");
+                break;
+            case 'C':
+                fprintf(fptr,"01");
+                break;
+            case 'G':
+                fprintf(fptr,"10");
+                break;
+            case 'T':
+                fprintf(fptr,"11");
+                break;
+        }
+
+    }
+    }
+    //fprintf(fptr,"11011011"); 
+    free(str);
+    fclose(fptr);
+
+    //FILE *fp;
+   //char c[] = "this is tutorialspoint";
+   //char buffer[8];
+
+   /* Open file for both reading and writing */
+   //fp = fopen("samp_bin.bit", "r");
+
+   /* Write data to the file */
+   //fwrite(c, strlen(c) + 1, 1, fp);
+
+   /* Seek to the beginning of the file */
+   //fseek(fp, 0, SEEK_SET);
+
+   /* Read and display data */
+   //fread(buffer, 8, 1, fp);
+   //printf("%s\n", buffer);
+   //fclose(fp);
+
+}