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Update htslib #490

Merged
merged 3 commits into from
Jul 1, 2024
Merged

Update htslib #490

merged 3 commits into from
Jul 1, 2024

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adamant-pwn
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Workflows create some linking errors due to libdeflate from htslib. Trying to update submodule and see if it fixes the issue.

@adamant-pwn adamant-pwn merged commit 5e27460 into master Jul 1, 2024
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@adamant-pwn adamant-pwn deleted the htslib-update branch July 1, 2024 19:25
adamant-pwn added a commit that referenced this pull request Jul 1, 2024
* install libdeflate-dev

* Link against libdeflate
adamant-pwn added a commit that referenced this pull request Jul 1, 2024
* Fix a bunch of compilation errors (#488)

Update spdlog, add missing include, etc

* Update htslib (#490)

* install libdeflate-dev

* Link against libdeflate
adamant-pwn added a commit that referenced this pull request Jul 1, 2024
* Fix a bunch of compilation errors (#488)

Update spdlog, add missing include, etc

* Update htslib (#490)

* install libdeflate-dev

* Link against libdeflate

* Install libdeflate on clang
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