New defaults for concat
, merge
, combine_*
#16421
Annotations
10 errors and 12 warnings
Run tests:
xarray/tests/test_backends.py#L6590
test_h5netcdf_storage_options
FutureWarning: In a future version of xarray the default value for data_vars will change from data_vars='all' to data_vars='minimal'. This is likely to lead to different results when multiple datasetshave matching variables with overlapping values. To opt in to new defaults and get rid of these warnings now use `set_options(use_new_combine_kwarg_defaults=True) or set data_vars explicitly.
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Run tests:
xarray/tests/test_concat.py#L493
TestConcatDataset.test_concat_simple[dim1-True-different]
FutureWarning: In a future version of xarray the default value for compat will change from compat='equals' to compat='override'. This change will result in the following ValueError:Cannot specify both coords='different' and compat='override'. The recommendation is to set compat explicitly for this case.
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Run tests:
xarray/tests/test_concat.py#L493
TestConcatDataset.test_concat_simple[dim2-False-different]
FutureWarning: In a future version of xarray the default value for compat will change from compat='equals' to compat='override'. This change will result in the following ValueError:Cannot specify both coords='different' and compat='override'. The recommendation is to set compat explicitly for this case.
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Run tests:
xarray/tests/test_concat.py#L514
TestConcatDataset.test_concat_merge_variables_present_in_some_datasets
FutureWarning: In a future version of xarray the default value for data_vars will change from data_vars='all' to data_vars='minimal'. This is likely to lead to different results when multiple datasetshave matching variables with overlapping values. To opt in to new defaults and get rid of these warnings now use `set_options(use_new_combine_kwarg_defaults=True) or set data_vars explicitly.
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Run tests:
xarray/tests/test_concat.py#L538
TestConcatDataset.test_concat_coords_kwarg[dim1-different]
FutureWarning: In a future version of xarray the default value for data_vars will change from data_vars='all' to data_vars='minimal'. This is likely to lead to different results when multiple datasetshave matching variables with overlapping values. To opt in to new defaults and get rid of these warnings now use `set_options(use_new_combine_kwarg_defaults=True) or set data_vars explicitly.
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Run tests:
xarray/tests/test_concat.py#L538
TestConcatDataset.test_concat_coords_kwarg[dim1-minimal]
FutureWarning: In a future version of xarray the default value for data_vars will change from data_vars='all' to data_vars='minimal'. This is likely to lead to different results when multiple datasetshave matching variables with overlapping values. To opt in to new defaults and get rid of these warnings now use `set_options(use_new_combine_kwarg_defaults=True) or set data_vars explicitly.
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Run tests:
xarray/tests/test_concat.py#L538
TestConcatDataset.test_concat_coords_kwarg[dim1-all]
FutureWarning: In a future version of xarray the default value for data_vars will change from data_vars='all' to data_vars='minimal'. This is likely to lead to different results when multiple datasetshave matching variables with overlapping values. To opt in to new defaults and get rid of these warnings now use `set_options(use_new_combine_kwarg_defaults=True) or set data_vars explicitly.
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Run tests:
xarray/tests/test_concat.py#L538
TestConcatDataset.test_concat_coords_kwarg[dim2-different]
FutureWarning: In a future version of xarray the default value for compat will change from compat='equals' to compat='override'. This change will result in the following ValueError:Cannot specify both coords='different' and compat='override'. The recommendation is to set compat explicitly for this case.
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Run tests:
xarray/tests/test_concat.py#L574
TestConcatDataset.test_concat_data_vars
FutureWarning: In a future version of xarray the default value for compat will change from compat='equals' to compat='override'. This change will result in the following ValueError:Cannot specify both data_vars='different' and compat='override'. The recommendation is to set compat explicitly for this case.
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Run tests:
xarray/tests/test_concat.py#L586
TestConcatDataset.test_concat_coords
FutureWarning: In a future version of xarray the default value for compat will change from compat='equals' to compat='override'. This change will result in the following ValueError:Cannot specify both coords='different' and compat='override'. The recommendation is to set compat explicitly for this case.
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Run tests:
home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/dask/_task_spec.py#L925
deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <fsspec.implementations.local.LocalFileOpener object at 0x7f1a0c5059c0>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None, 'phony_dims': 'access'}, manager_id='45e3b758-7631-4dd7-90b1-ad35e4f99d2a'), but file is not already closed. This may indicate a bug.
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Run tests:
home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/dask/_task_spec.py#L925
deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <fsspec.implementations.local.LocalFileOpener object at 0x7f1a0c5047c0>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None, 'phony_dims': 'access'}, manager_id='b5d96e36-4318-402d-858f-9795e7ad4cf3'), but file is not already closed. This may indicate a bug.
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Run tests:
home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/dask/_task_spec.py#L925
deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <fsspec.implementations.local.LocalFileOpener object at 0x7f1a0c5059c0>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None, 'phony_dims': 'access'}, manager_id='45e3b758-7631-4dd7-90b1-ad35e4f99d2a'), but file is not already closed. This may indicate a bug.
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Run tests:
home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/dask/_task_spec.py#L925
deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <fsspec.implementations.local.LocalFileOpener object at 0x7f1a0c5047c0>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None, 'phony_dims': 'access'}, manager_id='b5d96e36-4318-402d-858f-9795e7ad4cf3'), but file is not already closed. This may indicate a bug.
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Run tests:
xarray/core/duck_array_ops.py#L232
invalid value encountered in cast
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Run tests:
home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/array_api_strict/_data_type_functions.py#L45
invalid value encountered in cast
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Run tests:
xarray/core/duck_array_ops.py#L232
invalid value encountered in cast
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Run tests:
home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/array_api_strict/_data_type_functions.py#L45
invalid value encountered in cast
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Run tests:
home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/_storage/store.py#L39
The experimental Zarr V3 implementation in this version of Zarr-Python is not in alignment with the final V3 specification. This version will be removed in Zarr-Python 3 in favor of a spec compliant version.
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Run tests:
home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/_storage/store.py#L39
The experimental Zarr V3 implementation in this version of Zarr-Python is not in alignment with the final V3 specification. This version will be removed in Zarr-Python 3 in favor of a spec compliant version.
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Restore cached hypothesis directory
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release.
A separate `actions/cache/restore` step should be used instead.
See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
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Setup micromamba
Cache not found for keys: Linux-X64-py3.13-2025-02-25-c221d1a8acfc2436e37af6dc4a51ce46b7cd0d49c3905abb2b157ec14f7b956b-linux-64-xarray-tests-args-a3edb49-root-dcc80ee-bin-[object Promise]-file-ae1c30cc20ee9016e1f67897a09749a8e5b907d49d448d422645b591dc225b63
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