Skip to content

Commit

Permalink
updated to last revision
Browse files Browse the repository at this point in the history
  • Loading branch information
@kimrutherford @github-actions
kimrutherford authored and github-actions[bot] committed Jan 12, 2025
1 parent 969f2c5 commit 32b263a
Show file tree
Hide file tree
Showing 5 changed files with 17 additions and 0 deletions.
4 changes: 4 additions & 0 deletions results/all_coordinate_changes_file.tsv
View file
Original file line number Diff line number Diff line change
@@ -1,4 +1,8 @@
revision user date chromosome systematic_id primary_name feature_type added_or_removed value
10372 kmr44 2025-01-09 II SPBC685.02 5'UTR removed 2772853..2772883
10372 kmr44 2025-01-09 II SPBC685.02.1 5'UTR added 2772853..2772883
10367 vw253 2025-01-08 I SPAC1834.03c 5'UTR added complement(4699397..4699599)
10367 vw253 2025-01-08 I SPAC1834.03c 5'UTR removed complement(join(4699397..4699599,4699397..4699599))
9820 vw253 2024-06-26 I SPSNORNA.18 snoU24 snoRNA added complement(5369613..5369691)
9820 vw253 2024-06-26 I SPSNORNA.18 snoU24 snoRNA removed complement(5369640..5369686)
9300 vw253 2023-11-10 II SPBC685.02 exo5 CDS removed join(2772884..2773046,2773102..2773166,2773317..2774093,2774223..2774447)
Expand Down
4 changes: 4 additions & 0 deletions results/all_coordinate_changes_file_comments.tsv
View file
Original file line number Diff line number Diff line change
@@ -1,4 +1,8 @@
revision user date chromosome systematic_id primary_name feature_type added_or_removed value db_xref pombase_reference pombase_comments
10372 kmr44 2025-01-09 II SPBC685.02 5'UTR removed 2772853..2772883
10372 kmr44 2025-01-09 II SPBC685.02.1 5'UTR added 2772853..2772883
10367 vw253 2025-01-08 I SPAC1834.03c 5'UTR added complement(4699397..4699599)
10367 vw253 2025-01-08 I SPAC1834.03c 5'UTR removed complement(join(4699397..4699599,4699397..4699599))
9820 vw253 2024-06-26 I SPSNORNA.18 snoU24 snoRNA added complement(5369613..5369691)
9820 vw253 2024-06-26 I SPSNORNA.18 snoU24 snoRNA removed complement(5369640..5369686)
9300 vw253 2023-11-10 II SPBC685.02 exo5 CDS removed join(2772884..2773046,2773102..2773166,2773317..2774093,2774223..2774447)
Expand Down
4 changes: 4 additions & 0 deletions results/all_coordinate_changes_file_comments_no_type_change.tsv
View file
Original file line number Diff line number Diff line change
@@ -1,4 +1,8 @@
revision user date chromosome systematic_id primary_name feature_type added_or_removed value db_xref pombase_reference pombase_comments
10372 kmr44 2025-01-09 II SPBC685.02 5'UTR removed 2772853..2772883
10372 kmr44 2025-01-09 II SPBC685.02.1 5'UTR added 2772853..2772883
10367 vw253 2025-01-08 I SPAC1834.03c 5'UTR added complement(4699397..4699599)
10367 vw253 2025-01-08 I SPAC1834.03c 5'UTR removed complement(join(4699397..4699599,4699397..4699599))
9820 vw253 2024-06-26 I SPSNORNA.18 snoU24 snoRNA added complement(5369613..5369691)
9820 vw253 2024-06-26 I SPSNORNA.18 snoU24 snoRNA removed complement(5369640..5369686)
9300 vw253 2023-11-10 II SPBC685.02 exo5 CDS removed join(2772884..2773046,2773102..2773166,2773317..2774093,2774223..2774447)
Expand Down
2 changes: 2 additions & 0 deletions results/all_previous_coords.tsv
View file
Original file line number Diff line number Diff line change
Expand Up @@ -1506,6 +1506,7 @@ I SPAC1834.01 5'UTR 4691803..4691926 2023-01-12 EMBL:SPC05011 https://cura
I SPAC1834.02 3'UTR 4698493..4698559 2011-03-24 PMID:18641648,PMID:20118936 https://www.pombase.org/data/genome_sequence_and_features/artemis_files/OLD/20110304/
I SPAC1834.02 5'UTR 4693681..4693770 2023-01-12 PMID:21511999 https://curation.pombase.org/pombe-embl-repo/trunk/?p=8649
I SPAC1834.03c 5'UTR complement(4699397..4699544) 2023-01-12 EMBL:SPC00519 https://curation.pombase.org/pombe-embl-repo/trunk/?p=8649
I SPAC1834.03c 5'UTR complement(join(4699397..4699599,4699397..4699599)) 2025-01-08 PMID:30566651 https://curation.pombase.org/pombe-embl-repo/trunk/?p=10366
I SPAC1834.04 5'UTR 4699691..4699828 2023-01-12 PMID:21511999 https://curation.pombase.org/pombe-embl-repo/trunk/?p=8649
I SPAC1834.04 5'UTR 4699763..4699828 2011-03-24 PMID:18641648,PMID:20118936 https://www.pombase.org/data/genome_sequence_and_features/artemis_files/OLD/20110304/
I SPAC1834.05 3'UTR 4704322..4704657 2011-03-24 PMID:18641648,PMID:20118936 https://www.pombase.org/data/genome_sequence_and_features/artemis_files/OLD/20110304/
Expand Down Expand Up @@ -10491,6 +10492,7 @@ II SPBC660.16 5'UTR 230269..230367 2023-01-12 PMID:21511999 https://curati
II SPBC660.16 5'UTR 230318..230367 2011-03-24 EMBL:D89161 https://www.pombase.org/data/genome_sequence_and_features/artemis_files/OLD/20110304/
II SPBC660.17c 5'UTR complement(234249..234309) 2023-01-12 EMBL:AU007990 https://curation.pombase.org/pombe-embl-repo/trunk/?p=8649
II SPBC685.02 5'UTR 2772768..2772883 2023-01-12 PMID:18641648,PMID:20118936 https://curation.pombase.org/pombe-embl-repo/trunk/?p=8649
II SPBC685.02 5'UTR 2772853..2772883 2025-01-09 PMID:30566651 https://curation.pombase.org/pombe-embl-repo/trunk/?p=10371
II SPBC685.02 exo5 CDS join(2772884..2773046,2773102..2773166,2773317..2774093,2774223..2774447) 2023-11-10 https://curation.pombase.org/pombe-embl-repo/trunk/?p=9299
II SPBC685.04c 3'UTR complement(2776282..2776484) 2011-03-24 PMID:18641648,PMID:20118936 https://www.pombase.org/data/genome_sequence_and_features/artemis_files/OLD/20110304/
II SPBC685.04c 5'UTR complement(2776915..2777112) 2011-03-04 https://www.pombase.org/data/genome_sequence_and_features/artemis_files/OLD/20110204/
Expand Down
3 changes: 3 additions & 0 deletions results/all_qualifier_changes_file.tsv
View file
Original file line number Diff line number Diff line change
@@ -1,4 +1,7 @@
revision user date chromosome systematic_id primary_name feature_type qualifier_type added_or_removed value
10369 pascal 2025-01-08 III SPCC330.04c tdk1 CDS controlled_curation added term=subunit composition, homomeric(4); annotation_extension=during(GO:0072690); db_xref=PMID:39485800; date=20250108
10369 pascal 2025-01-08 III SPCC330.04c tdk1 CDS controlled_curation removed term=subunit composition, homomeric(4); annotation_extension=during(GO:0043934); db_xref=PMID:39485800; date=20250108
10368 pascal 2025-01-08 III SPCC330.04c tdk1 CDS controlled_curation added term=subunit composition, homomeric(4); annotation_extension=during(GO:0043934); db_xref=PMID:39485800; date=20250108
10358 vw253 2025-01-02 I SPAC24H6.10c aro4 CDS synomym added aro3
10358 vw253 2025-01-02 I SPAC24H6.10c aro4 CDS synonym removed aro3
10358 vw253 2025-01-02 I SPAP8A3.07c aro3 CDS synontm added aro4
Expand Down

0 comments on commit 32b263a

Please sign in to comment.