CLI: Make --debug flag avoid deleting unnecessary outputs

poldracklab · Oct 8, 2022 · ed21f2a · ed21f2a
1 parent e8b29db
commit ed21f2a
Showing 1 changed file with 4 additions and 0 deletions.
diff --git a/fitlins/cli/run.py b/fitlins/cli/run.py
@@ -261,6 +261,7 @@ def get_parser():
 
 def run_fitlins(argv=None):
     import re
+    import nipype
     from nipype import logging as nlogging
 
     warnings.showwarning = _warn_redirect
@@ -279,6 +280,9 @@ def run_fitlins(argv=None):
         for ign in opts.ignore or ()
     ]
 
+    if opts.debug:
+        nipype.config.set('execution', 'remove_unnecessary_outputs', False)
+
     log_level = 25 + 5 * (opts.quiet - opts.verbose)
     logger.setLevel(log_level)
     nlogging.getLogger('nipype.workflow').setLevel(log_level)