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Update docs/usage.rst
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effigies authored Oct 19, 2022
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Expand Up @@ -34,4 +34,7 @@ Command-Line Arguments
A Note about Processing CIFTIs
======================

FitLins (as of v0.7.0) can process CIFTI outputs (e.g., from fMRIPrep's ``--cifti-output`` flag). For FitLins to load fMRIPrep CIFTI outputs, define ``--space fsLR`` and ``--desc-label ""``. The FitLins statistical map outputs will be saved as ``.dscalar.nii`` images. Figures in the reports will include a surface representation as well as separate images for subcortical regions.
FitLins (as of v0.7.0) can process CIFTI outputs (e.g., from fMRIPrep's ``--cifti-output`` flag).
For FitLins to load fMRIPrep CIFTI outputs, define ``--space fsLR`` and ``--desc-label ""``.
The FitLins statistical map outputs will be saved as ``.dscalar.nii`` images.
Figures in the reports will include a surface representation as well as separate images for subcortical regions.

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