Merge pull request #41 from smoia/int/cd

Add Continuous Deployment tools (`auto`, packaging workflows, zenodo)

.autorc

@@ -0,0 +1,92 @@
+{
+  "plugins": [
+    "git-tag",
+    "conventional-commits",
+    "first-time-contributor",
+    "released"
+  ],
+  "owner": "physiopy",
+  "repo": "peakdet",
+  "name": "Stefano Moia",
+  "email": "[email protected]",
+  "labels": [
+    {
+      "name": "Majormod",
+      "changelogTitle": "💥 Breaking Change",
+      "description": "This PR breaks compatibility, and increments the major version (+1.0.0)",
+      "releaseType": "major",
+      "overwrite": true,
+      "color": "#05246d"
+    },
+    {
+      "name": "Minormod",
+      "changelogTitle": "🚀 Enhancement",
+      "description": "This PR generally closes an `Enhancement` issue. It increments the minor version (0.+1.0)",
+      "releaseType": "minor",
+      "overwrite": true,
+      "color": "#05246d"
+    },
+    {
+      "name": "Minormod-breaking",
+      "changelogTitle": "💥 Breaking Change during development",
+      "description": "For development only, this PR increments the minor version (0.+1.0) but breaks compatibility",
+      "releaseType": "minor",
+      "overwrite": true,
+      "color": "#05246d"
+    },
+    {
+      "name": "BugFIX",
+      "changelogTitle": "🐛 Bug Fix",
+      "description": "This PR generally closes a `Bug` issue, and increments the patch version (0.0.+1)",
+      "releaseType": "patch",
+      "overwrite": true,
+      "color": "#d73a4a"
+    },
+    {
+      "name": "Documentation",
+      "changelogTitle": "📝 Documentation",
+      "description": "This issue or PR is about the documentation ",
+      "releaseType": "none",
+      "overwrite": true,
+      "color": "#1D70CF"
+    },
+    {
+      "name": "Testing",
+      "changelogTitle": "⚠️ Tests",
+      "description": "This is for testing features, writing tests or producing testing code",
+      "releaseType": "none",
+      "overwrite": true,
+      "color": "#ffb5b4"
+    },
+    {
+      "name": "Internal",
+      "changelogTitle": "🏠 Internal",
+      "description": "Changes affect the internal API. It doesn't increase the version, but produces a changelog",
+      "releaseType": "none",
+      "overwrite": true,
+      "color": "#ffffff"
+    },
+    {
+      "name": "Outreach",
+      "changelogTitle": "🖋️  Outreach",
+      "description": "Issue about outreaching of any form",
+      "releaseType": "none",
+      "overwrite": true,
+      "color": "#0e8a16"
+    },
+    {
+      "name": "Skip release",
+      "description": "This PR preserves the current version when merged, and doesn't appear in the changelog",
+      "releaseType": "skip",
+      "overwrite": true,
+      "color": "#ffffff"
+    },
+    {
+      "name": "Release",
+      "description": "For PR only, trigger a release at the merge",
+      "releaseType": "release",
+      "overwrite": true,
+      "color": "#FFFFFF"
+    }
+  ]
+}

.github/workflows/auto-release.yml

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+# This workflows will create a release using auto when a PR is merged in master.
+
+name: Auto-release on PR merge
+
+on:
+  # ATM, this is the closest trigger to a PR merging
+  push:
+    branches:
+      - master
+
+jobs:
+  auto-release:
+    runs-on: ubuntu-18.04
+    # Set skip ci to avoid loops
+    if: "!contains(github.event.head_commit.message, 'ci skip') && !contains(github.event.head_commit.message, 'skip ci')"
+    # Set bash as default shell for jobs
+    defaults:
+      run:
+        shell: bash
+    steps:
+    - name: Checkout source
+      uses: actions/checkout@v2
+      with:
+        # Fetch all history for all branches and tags
+        fetch-depth: 0
+        # Use token with write access to the repo
+        token: ${{ secrets.GH_TOKEN }}
+    - name: Download and install latest auto
+      env:
+        # OS can be linux, macos, or win
+        OS: linux
+        # Retrieve URL of latest auto, download it, unzip it, and give exec permissions.
+      run: |
+        curl -vkL -o - $( curl -s https://api.github.com/repos/intuit/auto/releases/latest \
+        | grep browser_download_url | grep ${OS} | awk -F'"' '{print $4}') \
+        | gunzip > ~/auto
+        chmod a+x ~/auto
+    - name: Create release without version prefix
+      env:
+        GITHUB_TOKEN: ${{ secrets.GH_TOKEN }}
+        # Run auto release, don't use 'v' prefix, and be verbose
+      run: |
+        ~/auto shipit --no-version-prefix -v

.github/workflows/python-publish.yml

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+# This workflows will upload a Python Package using Twine when a release is created
+# For more information see: https://help.github.com/en/actions/language-and-framework-guides/using-python-with-github-actions#publishing-to-package-registries
+
+name: Upload Python Package
+
+on:
+  release:
+    types: [created]
+
+jobs:
+  deploy:
+
+    runs-on: ubuntu-18.04
+
+    steps:
+    - name: Checkout source
+      uses: actions/checkout@v2
+    - name: Set up Python
+      uses: actions/setup-python@v2
+      with:
+        python-version: '3.6'
+    - name: Install dependencies
+      run: |
+        python -m pip install --upgrade pip
+        pip install setuptools wheel twine
+    - name: Build and publish
+      env:
+        TWINE_USERNAME: __token__
+        TWINE_PASSWORD: ${{ secrets.PYPI_PASSWORD }}
+      run: |
+        python setup.py sdist bdist_wheel
+        twine upload dist/*

.zenodo.json

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+{
+    "license": "Apache-2.0", 
+    "title": "physiopy/peakdet: A python toolbox for reproducible physiological data analysis",
+    "upload_type": "software",
+    "creators": [
+        {
+            "affiliation": "McGill University", 
+            "name": "Elizabeth DuPre"
+        }, 
+        {
+            "affiliation": "McGill University", 
+            "name": "Ross Markello"
+        }, 
+        {
+            "orcid": "0000-0002-2553-3327", 
+            "affiliation": "BCBL - Basque Center on Cognition, Brain and Language", 
+            "name": "Stefano Moia"
+        }
+    ], 
+    "access_right": "open"
+}