Update update-page.yml

pathoplexus · Aug 30, 2024 · d0584b5 · d0584b5
1 parent 05fdb8a
commit d0584b5
Showing 1 changed file with 4 additions and 26 deletions.
diff --git a/.github/workflows/update-page.yml b/.github/workflows/update-page.yml
@@ -21,7 +21,6 @@ jobs:
         import os
         import html
         from datetime import datetime
-        import shutil
 
         def get_file_icon(file):
             ext = os.path.splitext(file)[1].lower()
@@ -40,23 +39,13 @@ jobs:
 
         def generate_html():
             file_list = []
-            example_data_dir = './example_data'
-            
-            if not os.path.exists(example_data_dir):
-                print(f"Error: {example_data_dir} directory not found.")
-                return
-
-            for root, dirs, files in os.walk(example_data_dir):
+            for root, dirs, files in os.walk('.'):
                 for file in files:
                     if file != 'index.html' and not file.startswith('.'):
                         path = os.path.join(root, file)
-                        rel_path = os.path.relpath(path, example_data_dir)
                         size = os.path.getsize(path)
                         mtime = os.path.getmtime(path)
-                        file_list.append((rel_path, size, mtime))
-                        
-                        # Copy file to current directory
-                        shutil.copy2(path, os.path.join('.', rel_path))
+                        file_list.append((path, size, mtime))
 
             html_content = '''
             <!DOCTYPE html>
@@ -117,28 +106,17 @@ jobs:
             with open('index.html', 'w') as f:
                 f.write(html_content)
 
-            print(f"index.html has been created in {os.getcwd()}")
-
         generate_html()
         EOF
 
     - name: Generate Pathoplexus example data list
       run: python generate_list.py
 
-    - name: Debug - List directory contents
-      run: |
-        echo "Current directory:"
-        pwd
-        echo "Files in current directory:"
-        ls -la
-
     - name: Commit and push to gh-pages
       run: |
         git config --global user.name 'GitHub Action'
         git config --global user.email '[email protected]'
         git checkout -b gh-pages
-        git add index.html || echo "index.html not found"
-        git add example_data/* || echo "No files in example_data"
-        git status
-        git commit -m "Update Pathoplexus example data list" || echo "No changes to commit"
+        git add index.html
+        git commit -m "Update Pathoplexus example data list" || exit 0
         git push -f origin gh-pages