v0.0.8

info

• Displays current package, kallisto and bustools versions.

ref

• Input arguments have changed: ref now takes a genomic FASTA file and GTF as positional arguments
• The genome is sliced into cDNA and intron (if --velocity) FASTAs
• New option: -c Path to the cDNA FASTA to be generated
• New option: -n Path to the intron FASTA to be generated (required for --velocity)
• New option: -a Path to generate cDNA transcripts to be captured (required for --velocity)
• New option: -r Path to generate intron transcripts to be captured (required for --velocity)

Binaries

• Kallisto and Bustools binaries for Windows, Linux and MacOS are now included in the package. Run kb info for versions.