Skip to content

Commit

Permalink
Merge pull request #6325 from openjournals/joss.07560
Browse files Browse the repository at this point in the history
Merging automatically
  • Loading branch information
editorialbot authored Jan 9, 2025
2 parents 1a78585 + b2bbcd7 commit 9e08a9c
Show file tree
Hide file tree
Showing 4 changed files with 1,111 additions and 0 deletions.
307 changes: 307 additions & 0 deletions joss.07560/10.21105.joss.07560.crossref.xml
Original file line number Diff line number Diff line change
@@ -0,0 +1,307 @@
<?xml version="1.0" encoding="UTF-8"?>
<doi_batch xmlns="http://www.crossref.org/schema/5.3.1"
xmlns:ai="http://www.crossref.org/AccessIndicators.xsd"
xmlns:rel="http://www.crossref.org/relations.xsd"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
version="5.3.1"
xsi:schemaLocation="http://www.crossref.org/schema/5.3.1 http://www.crossref.org/schemas/crossref5.3.1.xsd">
<head>
<doi_batch_id>20250109214820-b646f08383014fad8495887259ad39840593b493</doi_batch_id>
<timestamp>20250109214820</timestamp>
<depositor>
<depositor_name>JOSS Admin</depositor_name>
<email_address>[email protected]</email_address>
</depositor>
<registrant>The Open Journal</registrant>
</head>
<body>
<journal>
<journal_metadata>
<full_title>Journal of Open Source Software</full_title>
<abbrev_title>JOSS</abbrev_title>
<issn media_type="electronic">2475-9066</issn>
<doi_data>
<doi>10.21105/joss</doi>
<resource>https://joss.theoj.org</resource>
</doi_data>
</journal_metadata>
<journal_issue>
<publication_date media_type="online">
<month>01</month>
<year>2025</year>
</publication_date>
<journal_volume>
<volume>10</volume>
</journal_volume>
<issue>105</issue>
</journal_issue>
<journal_article publication_type="full_text">
<titles>
<title>UnfoldMakie.jl: EEG/ERP visualization package</title>
</titles>
<contributors>
<person_name sequence="first" contributor_role="author">
<given_name>Vladimir</given_name>
<surname>Mikheev</surname>
<affiliations>
<institution><institution_name>University of Stuttgart, Institute for Visualization and Interactive Systems, Germany</institution_name></institution>
</affiliations>
<ORCID>https://orcid.org/0000-0002-4738-6655</ORCID>
</person_name>
<person_name sequence="additional"
contributor_role="author">
<given_name>Benedikt</given_name>
<surname>Ehinger</surname>
<affiliations>
<institution><institution_name>University of Stuttgart, Institute for Visualization and Interactive Systems, Germany</institution_name></institution>
<institution><institution_name>University of Stuttgart, Stuttgart Center for Simulation Science, Germany</institution_name></institution>
</affiliations>
<ORCID>https://orcid.org/0000-0002-6276-3332</ORCID>
</person_name>
</contributors>
<publication_date>
<month>01</month>
<day>09</day>
<year>2025</year>
</publication_date>
<pages>
<first_page>7560</first_page>
</pages>
<publisher_item>
<identifier id_type="doi">10.21105/joss.07560</identifier>
</publisher_item>
<ai:program name="AccessIndicators">
<ai:license_ref applies_to="vor">http://creativecommons.org/licenses/by/4.0/</ai:license_ref>
<ai:license_ref applies_to="am">http://creativecommons.org/licenses/by/4.0/</ai:license_ref>
<ai:license_ref applies_to="tdm">http://creativecommons.org/licenses/by/4.0/</ai:license_ref>
</ai:program>
<rel:program>
<rel:related_item>
<rel:description>Software archive</rel:description>
<rel:inter_work_relation relationship-type="references" identifier-type="doi">10.5281/zenodo.14512987</rel:inter_work_relation>
</rel:related_item>
<rel:related_item>
<rel:description>GitHub review issue</rel:description>
<rel:inter_work_relation relationship-type="hasReview" identifier-type="uri">https://github.com/openjournals/joss-reviews/issues/7560</rel:inter_work_relation>
</rel:related_item>
</rel:program>
<doi_data>
<doi>10.21105/joss.07560</doi>
<resource>https://joss.theoj.org/papers/10.21105/joss.07560</resource>
<collection property="text-mining">
<item>
<resource mime_type="application/pdf">https://joss.theoj.org/papers/10.21105/joss.07560.pdf</resource>
</item>
</collection>
</doi_data>
<citation_list>
<citation key="mikheev2024art">
<article_title>The art of brainwaves: A survey on event-related potential visualization practices</article_title>
<author>Mikheev</author>
<journal_title>Aperture Neuro</journal_title>
<volume>4</volume>
<doi>10.52294/001c.116386</doi>
<cYear>2024</cYear>
<unstructured_citation>Mikheev, V., Skukies, R., &amp; Ehinger, B. V. (2024). The art of brainwaves: A survey on event-related potential visualization practices. Aperture Neuro, 4. https://doi.org/10.52294/001c.116386</unstructured_citation>
</citation>
<citation key="ehinger2019unfold">
<article_title>Unfold: An integrated toolbox for overlap correction, non-linear modeling, and regression-based EEG analysis</article_title>
<author>Ehinger</author>
<journal_title>PeerJ</journal_title>
<volume>7</volume>
<doi>10.5281/zenodo.5759066</doi>
<cYear>2019</cYear>
<unstructured_citation>Ehinger, B. V., &amp; Dimigen, O. (2019). Unfold: An integrated toolbox for overlap correction, non-linear modeling, and regression-based EEG analysis. PeerJ, 7, e7838. https://doi.org/10.5281/zenodo.5759066</unstructured_citation>
</citation>
<citation key="danisch2021makie">
<article_title>Makie.jl: Flexible high-performance data visualization for julia</article_title>
<author>Danisch</author>
<journal_title>Journal of Open Source Software</journal_title>
<issue>65</issue>
<volume>6</volume>
<doi>10.21105/joss.03349</doi>
<cYear>2021</cYear>
<unstructured_citation>Danisch, S., &amp; Krumbiegel, J. (2021). Makie.jl: Flexible high-performance data visualization for julia. Journal of Open Source Software, 6(65), 3349. https://doi.org/10.21105/joss.03349</unstructured_citation>
</citation>
<citation key="jung1998analyzing">
<article_title>Analyzing and visualizing single-trial event-related potentials</article_title>
<author>Jung</author>
<journal_title>Advances in neural information processing systems</journal_title>
<volume>11</volume>
<doi>10.1002/hbm.1050</doi>
<cYear>1998</cYear>
<unstructured_citation>Jung, T.-P., Makeig, S., Westerfield, M., Townsend, J., Courchesne, E., &amp; Sejnowski, T. J. (1998). Analyzing and visualizing single-trial event-related potentials. Advances in Neural Information Processing Systems, 11. https://doi.org/10.1002/hbm.1050</unstructured_citation>
</citation>
<citation key="ten2006design">
<article_title>Design and evaluation of tiled parallel coordinate visualization of multichannel EEG data</article_title>
<author>Ten Caat</author>
<journal_title>IEEE Transactions on Visualization and Computer Graphics</journal_title>
<issue>1</issue>
<volume>13</volume>
<doi>10.1109/tvcg.2007.9</doi>
<cYear>2006</cYear>
<unstructured_citation>Ten Caat, M., Maurits, N. M., &amp; Roerdink, J. B. (2006). Design and evaluation of tiled parallel coordinate visualization of multichannel EEG data. IEEE Transactions on Visualization and Computer Graphics, 13(1), 70–79. https://doi.org/10.1109/tvcg.2007.9</unstructured_citation>
</citation>
<citation key="delorme2004eeglab">
<article_title>EEGLAB: An open source toolbox for analysis of single-trial EEG dynamics including independent component analysis</article_title>
<author>Delorme</author>
<journal_title>Journal of neuroscience methods</journal_title>
<issue>1</issue>
<volume>134</volume>
<doi>10.1016/j.jneumeth.2003.10.009</doi>
<cYear>2004</cYear>
<unstructured_citation>Delorme, A., &amp; Makeig, S. (2004). EEGLAB: An open source toolbox for analysis of single-trial EEG dynamics including independent component analysis. Journal of Neuroscience Methods, 134(1), 9–21. https://doi.org/10.1016/j.jneumeth.2003.10.009</unstructured_citation>
</citation>
<citation key="oostenveld2011fieldtrip">
<article_title>FieldTrip: Open source software for advanced analysis of MEG, EEG, and invasive electrophysiological data</article_title>
<author>Oostenveld</author>
<journal_title>Computational intelligence and neuroscience</journal_title>
<issue>1</issue>
<volume>2011</volume>
<doi>10.1155/2011/156869</doi>
<cYear>2011</cYear>
<unstructured_citation>Oostenveld, R., Fries, P., Maris, E., &amp; Schoffelen, J.-M. (2011). FieldTrip: Open source software for advanced analysis of MEG, EEG, and invasive electrophysiological data. Computational Intelligence and Neuroscience, 2011(1), 156869. https://doi.org/10.1155/2011/156869</unstructured_citation>
</citation>
<citation key="lopez2014erplab">
<article_title>ERPLAB: An open-source toolbox for the analysis of event-related potentials</article_title>
<author>Lopez-Calderon</author>
<journal_title>Frontiers in human neuroscience</journal_title>
<volume>8</volume>
<doi>10.3389/fnhum.2014.00213</doi>
<cYear>2014</cYear>
<unstructured_citation>Lopez-Calderon, J., &amp; Luck, S. J. (2014). ERPLAB: An open-source toolbox for the analysis of event-related potentials. Frontiers in Human Neuroscience, 8, 213. https://doi.org/10.3389/fnhum.2014.00213</unstructured_citation>
</citation>
<citation key="tadel2019meg">
<article_title>MEG/EEG group analysis with brainstorm</article_title>
<author>Tadel</author>
<journal_title>Frontiers in neuroscience</journal_title>
<volume>13</volume>
<doi>10.3389/fnins.2019.00076</doi>
<cYear>2019</cYear>
<unstructured_citation>Tadel, F., Bock, E., Niso, G., Mosher, J. C., Cousineau, M., Pantazis, D., Leahy, R. M., &amp; Baillet, S. (2019). MEG/EEG group analysis with brainstorm. Frontiers in Neuroscience, 13, 76. https://doi.org/10.3389/fnins.2019.00076</unstructured_citation>
</citation>
<citation key="ehigner_2018eegvis">
<article_title>EEGVIS toolbox</article_title>
<author>Ehinger</author>
<doi>10.5281/zenodo.1312813</doi>
<cYear>2018</cYear>
<unstructured_citation>Ehinger, B. V. (2018). EEGVIS toolbox (Version 0.1). https://doi.org/10.5281/zenodo.1312813</unstructured_citation>
</citation>
<citation key="Wysokinski_NeuroAnalyzer">
<article_title>NeuroAnalyzer</article_title>
<author>Wysokiński</author>
<doi>10.5281/zenodo.14010334</doi>
<cYear>2024</cYear>
<unstructured_citation>Wysokiński, A. (2024). NeuroAnalyzer (Version 0.24.11). https://doi.org/10.5281/zenodo.14010334</unstructured_citation>
</citation>
<citation key="Pereyra_EEGToolkit">
<article_title>EEGToolkit.jl</article_title>
<author>Pereyra</author>
<cYear>2024</cYear>
<unstructured_citation>Pereyra, S. L. (2024). EEGToolkit.jl (Version 0.2). https://github.com/slopezpereyra/EEGToolkit.jl</unstructured_citation>
</citation>
<citation key="Gramfort_MEG_and_EEG_2013">
<article_title>MEG and EEG Data Analysis with MNE-Python</article_title>
<author>Gramfort</author>
<journal_title>Frontiers in Neuroscience</journal_title>
<issue>267</issue>
<volume>7</volume>
<doi>10.3389/fnins.2013.00267</doi>
<cYear>2013</cYear>
<unstructured_citation>Gramfort, A., Luessi, M., Larson, E., Engemann, D. A., Strohmeier, D., Brodbeck, C., Goj, R., Jas, M., Brooks, T., Parkkonen, L., &amp; Hämäläinen, M. S. (2013). MEG and EEG Data Analysis with MNE-Python. Frontiers in Neuroscience, 7(267), 1–13. https://doi.org/10.3389/fnins.2013.00267</unstructured_citation>
</citation>
<citation key="Luke_Neuroimaging">
<article_title>Neuroimaging.jl</article_title>
<author>Luke</author>
<cYear>2021</cYear>
<unstructured_citation>Luke, R. (2021). Neuroimaging.jl (Version 1.1.2). https://github.com/rob-luke/Neuroimaging.jl</unstructured_citation>
</citation>
<citation key="Krumbiegel_AlgebraOfGraphics">
<article_title>AlgebraOfGraphics.jl</article_title>
<author>Krumbiegel</author>
<cYear>2024</cYear>
<unstructured_citation>Krumbiegel, J., &amp; Vertechi, P. (2024). AlgebraOfGraphics.jl (Version 0.8.13). https://github.com/MakieOrg/AlgebraOfGraphics.jl</unstructured_citation>
</citation>
<citation key="BenchmarkTools_jl_2016">
<article_title>Robust benchmarking in noisy environments</article_title>
<author>Chen</author>
<journal_title>arXiv e-prints</journal_title>
<doi>10.48550/arXiv.1608.04295</doi>
<cYear>2016</cYear>
<unstructured_citation>Chen, J., &amp; Revels, J. (2016). Robust benchmarking in noisy environments. arXiv e-Prints. https://doi.org/10.48550/arXiv.1608.04295</unstructured_citation>
</citation>
<citation key="robbins2012eegvis">
<article_title>EEGVIS: A matlab toolbox for browsing, exploring, and viewing large datasets</article_title>
<author>Robbins</author>
<journal_title>Frontiers in Neuroinformatics</journal_title>
<volume>6</volume>
<doi>10.3389/fninf.2012.00017</doi>
<cYear>2012</cYear>
<unstructured_citation>Robbins, K. A. (2012). EEGVIS: A matlab toolbox for browsing, exploring, and viewing large datasets. Frontiers in Neuroinformatics, 6, 17. https://doi.org/10.3389/fninf.2012.00017</unstructured_citation>
</citation>
<citation key="Documenter_jl">
<article_title>Documenter: A documentation generator for julia</article_title>
<author>Hatherly</author>
<cYear>2024</cYear>
<unstructured_citation>Hatherly, M., Piibeleht, M., &amp; Ekre, F. (2024). Documenter: A documentation generator for julia (Version 1.7). https://github.com/JuliaDocs/Documenter.jl</unstructured_citation>
</citation>
<citation key="topoplots_jl">
<article_title>TopoPlots.jl: A julia package for topoplot generation</article_title>
<author>Ehinger</author>
<doi>10.5281/zenodo.14179492</doi>
<cYear>2024</cYear>
<unstructured_citation>Ehinger, B. V., Alday, P., Singhvi, A., &amp; Simon, D. (2024). TopoPlots.jl: A julia package for topoplot generation (Version 0.2.0). https://doi.org/10.5281/zenodo.14179492</unstructured_citation>
</citation>
<citation key="pymne_jl">
<article_title>PyMNE.jl</article_title>
<author>Alday</author>
<doi>10.5281/zenodo.14172218</doi>
<cYear>2024</cYear>
<unstructured_citation>Alday, P., &amp; Arslan, A. (2024). PyMNE.jl (Version 0.2.2). https://doi.org/10.5281/zenodo.14172218</unstructured_citation>
</citation>
<citation key="crameri2020misuse">
<article_title>The misuse of colour in science communication</article_title>
<author>Crameri</author>
<journal_title>Nature communications</journal_title>
<issue>1</issue>
<volume>11</volume>
<doi>10.1038/s41467-020-19160-7</doi>
<cYear>2020</cYear>
<unstructured_citation>Crameri, F., Shephard, G. E., &amp; Heron, P. J. (2020). The misuse of colour in science communication. Nature Communications, 11(1), 5444. https://doi.org/10.1038/s41467-020-19160-7</unstructured_citation>
</citation>
<citation key="moreland2015we">
<article_title>Why we use bad color maps and what you can do about it.</article_title>
<author>Moreland</author>
<doi>10.2352/issn.2470-1173.2016.16.hvei-133</doi>
<cYear>2015</cYear>
<unstructured_citation>Moreland, K. D. (2015). Why we use bad color maps and what you can do about it. Sandia National Lab.(SNL-NM), Albuquerque, NM (United States). https://doi.org/10.2352/issn.2470-1173.2016.16.hvei-133</unstructured_citation>
</citation>
<citation key="simon_kornblith_2023_8344531">
<article_title>JuliaDSP/DSP.jl: v0.7.9</article_title>
<author>Kornblith</author>
<doi>10.5281/zenodo.8344531</doi>
<cYear>2023</cYear>
<unstructured_citation>Kornblith, S., Lynch, G., Holters, M., Santos, J. F., Russell, S., Kickliter, J., Bezanson, J., Adalsteinsson, G., Arslan, A., Yamamoto, R., jordancluts, Pastell, M., Kelman, T., Arthur, B., Krauss, T., HDictus, El-Saawy, H., Kofron, J., Hanson, E., … Smith, J. (2023). JuliaDSP/DSP.jl: v0.7.9 (Version v0.7.9). Zenodo. https://doi.org/10.5281/zenodo.8344531</unstructured_citation>
</citation>
<citation key="JSSv107i04">
<article_title>DataFrames.jl: Flexible and fast tabular data in julia</article_title>
<author>Bouchet-Valat</author>
<journal_title>Journal of Statistical Software</journal_title>
<issue>4</issue>
<volume>107</volume>
<doi>10.18637/jss.v107.i04</doi>
<cYear>2023</cYear>
<unstructured_citation>Bouchet-Valat, M., &amp; Kamiński, B. (2023). DataFrames.jl: Flexible and fast tabular data in julia. Journal of Statistical Software, 107(4), 1–32. https://doi.org/10.18637/jss.v107.i04</unstructured_citation>
</citation>
<citation key="Schepers_UnfoldSim_jl">
<article_title>UnfoldSim.jl</article_title>
<author>Schepers</author>
<doi>10.5281/zenodo.13933412</doi>
<cYear>2024</cYear>
<unstructured_citation>Schepers, J., Lips, L., Marathe, M., &amp; Ehinger, B. (2024). UnfoldSim.jl. https://doi.org/10.5281/zenodo.13933412</unstructured_citation>
</citation>
</citation_list>
</journal_article>
</journal>
</body>
</doi_batch>
Binary file added joss.07560/10.21105.joss.07560.pdf
Binary file not shown.
Loading

0 comments on commit 9e08a9c

Please sign in to comment.