Add envmodules

omnibenchmark · Jun 7, 2024 · 3ac9757 · 3ac9757
1 parent e3daebe
commit 3ac9757
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Showing 13 changed files with 243 additions and 179 deletions.
diff --git a/README.md b/README.md
@@ -2,6 +2,12 @@
 
 Data model for omnibenchmark.
 
+# How to operate
+
+1. Modify `src/omni_schema/schema/omni_schema.yaml` manually
+2. `make all`
+3. Consider `make deploy`
+
 ## Website
 
 [https://omnibenchmark.github.io/omni-schema](https://omnibenchmark.github.io/omni-schema)

diff --git a/project/excel/omni_schema.xlsx b/project/excel/omni_schema.xlsx
diff --git a/project/graphql/omni_schema.graphql b/project/graphql/omni_schema.graphql
@@ -39,6 +39,7 @@ type Module
     repo: String!
     exclude: [Module]
     parameters: [Parameter]
+    envmodules: [String]
   }
 
 type Orchestrator

diff --git a/project/jsonld/omni_schema.context.jsonld b/project/jsonld/omni_schema.context.jsonld
@@ -1,7 +1,7 @@
 {
    "comments": {
       "description": "Auto generated by LinkML jsonld context generator",
-      "generation_date": "2024-03-08T14:09:12",
+      "generation_date": "2024-06-07T14:53:13",
       "source": "omni_schema.yaml"
    },
    "@context": {

diff --git a/project/jsonld/omni_schema.jsonld b/project/jsonld/omni_schema.jsonld
@@ -677,6 +677,19 @@
       ],
       "range": "IOFile",
       "@type": "SlotDefinition"
+    },
+    {
+      "name": "envmodules",
+      "definition_uri": "https://w3id.org/omnibenchmark/omni-schema/envmodules",
+      "from_schema": "https://w3id.org/omnibenchmark/omni-schema",
+      "slot_uri": "https://w3id.org/omnibenchmark/omni-schema/envmodules",
+      "multivalued": true,
+      "owner": "Module",
+      "domain_of": [
+        "Module"
+      ],
+      "range": "string",
+      "@type": "SlotDefinition"
     }
   ],
   "classes": [
@@ -780,7 +793,8 @@
         "description",
         "repo",
         "exclude",
-        "parameters"
+        "parameters",
+        "envmodules"
       ],
       "slot_usage": {},
       "class_uri": "https://w3id.org/omnibenchmark/omni-schema/Module",
@@ -829,9 +843,9 @@
   ],
   "metamodel_version": "1.7.0",
   "source_file": "omni_schema.yaml",
-  "source_file_date": "2024-03-08T14:09:08",
-  "source_file_size": 4222,
-  "generation_date": "2024-03-08T14:09:12",
+  "source_file_date": "2024-06-07T14:53:10",
+  "source_file_size": 4296,
+  "generation_date": "2024-06-07T14:53:14",
   "@type": "SchemaDefinition",
   "@context": [
     "project/jsonld/omni_schema.context.jsonld",

diff --git a/project/jsonschema/omni_schema.schema.json b/project/jsonschema/omni_schema.schema.json
@@ -106,6 +106,12 @@
                     "description": "A human-readable description for a thing",
                     "type": "string"
                 },
+                "envmodules": {
+                    "items": {
+                        "type": "string"
+                    },
+                    "type": "array"
+                },
                 "exclude": {
                     "description": "Ignore these module's outputs as input.",
                     "items": {