sismonr v2.0.0

New features

• Added a function to transform abundance data into RNAseq-like data (read counts)

Stochastic model

• Added the degradation of molecules even if bound to another molecule or in a complex
• Ploidy is now defined for a system, not for a population
• Initial abundances are now available when generating a population, calculated accounting for the ploidy of the system
• Corrected a mistake in the addEdge function for sampling of kinetic parameters

Visualisation features

• Added the option to focus on a subset of genes/complexes for plotSimulation and plotHeatMap functions
• Corrected y-axis title for plotSimulation function

sismonr v1.1.4

• Fixed for Solaris installation
• Uploaded to CRAN

sismonr v1.1.2

• Added tests (with condition for skipping tests if Julia v1.0 or later is not installed)
• Successful submission to CRAN